Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPAS4Q8IUM7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPAS4Q8IUM7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.41■□□□□ 0.54
NPAS4Q8IUM7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPAS4Q8IUM7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NPAS4Q8IUM7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NPAS4Q8IUM7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPAS4Q8IUM7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPAS4Q8IUM7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NPAS4Q8IUM7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.41■□□□□ 0.54
NPAS4Q8IUM7 RNA5SP421-201ENST00000516864 134 ntBASIC18.41■□□□□ 0.54
NPAS4Q8IUM7 DUX4L17-201ENST00000557360 1267 ntBASIC18.41■□□□□ 0.54
NPAS4Q8IUM7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.41■□□□□ 0.54
NPAS4Q8IUM7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.41■□□□□ 0.54
NPAS4Q8IUM7 AL390955.2-201ENST00000603032 514 ntBASIC18.41■□□□□ 0.54
NPAS4Q8IUM7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NPAS4Q8IUM7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NPAS4Q8IUM7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.41■□□□□ 0.54
NPAS4Q8IUM7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPAS4Q8IUM7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPAS4Q8IUM7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.41■□□□□ 0.54
NPAS4Q8IUM7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
NPAS4Q8IUM7 BICD1-207ENST00000551848 1962 ntBASIC18.41■□□□□ 0.54
NPAS4Q8IUM7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NPAS4Q8IUM7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPAS4Q8IUM7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.4■□□□□ 0.54
NPAS4Q8IUM7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPAS4Q8IUM7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.4■□□□□ 0.54
NPAS4Q8IUM7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.4■□□□□ 0.54
NPAS4Q8IUM7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPAS4Q8IUM7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPAS4Q8IUM7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPAS4Q8IUM7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
NPAS4Q8IUM7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.4■□□□□ 0.54
NPAS4Q8IUM7 FAM58DP-201ENST00000428076 619 ntBASIC18.4■□□□□ 0.54
NPAS4Q8IUM7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
NPAS4Q8IUM7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPAS4Q8IUM7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPAS4Q8IUM7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.4■□□□□ 0.54
NPAS4Q8IUM7 DUX4L27-201ENST00000554796 1261 ntBASIC18.4■□□□□ 0.54
NPAS4Q8IUM7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.4■□□□□ 0.54
NPAS4Q8IUM7 MIR4745-201ENST00000577608 62 ntBASIC18.4■□□□□ 0.54
NPAS4Q8IUM7 AP001059.3-201ENST00000619053 235 ntBASIC18.4■□□□□ 0.54
NPAS4Q8IUM7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.4■□□□□ 0.54
NPAS4Q8IUM7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPAS4Q8IUM7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NPAS4Q8IUM7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.4■□□□□ 0.54
NPAS4Q8IUM7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
NPAS4Q8IUM7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.4■□□□□ 0.54
NPAS4Q8IUM7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.4■□□□□ 0.54
NPAS4Q8IUM7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.4■□□□□ 0.54
NPAS4Q8IUM7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
NPAS4Q8IUM7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.4■□□□□ 0.54
NPAS4Q8IUM7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NPAS4Q8IUM7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.39■□□□□ 0.54
NPAS4Q8IUM7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
NPAS4Q8IUM7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.39■□□□□ 0.54
NPAS4Q8IUM7 AC012569.1-201ENST00000591191 1524 ntBASIC18.39■□□□□ 0.54
NPAS4Q8IUM7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
NPAS4Q8IUM7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
NPAS4Q8IUM7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
NPAS4Q8IUM7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.39■□□□□ 0.53
NPAS4Q8IUM7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NPAS4Q8IUM7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPAS4Q8IUM7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NPAS4Q8IUM7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.39■□□□□ 0.53
NPAS4Q8IUM7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.39■□□□□ 0.53
NPAS4Q8IUM7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.39■□□□□ 0.53
NPAS4Q8IUM7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.39■□□□□ 0.53
NPAS4Q8IUM7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.39■□□□□ 0.53
NPAS4Q8IUM7 AC051619.7-201ENST00000568314 623 ntBASIC18.39■□□□□ 0.53
NPAS4Q8IUM7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPAS4Q8IUM7 AL009183.1-201ENST00000603760 355 ntBASIC18.39■□□□□ 0.53
NPAS4Q8IUM7 AJ011932.1-201ENST00000621707 465 ntBASIC18.39■□□□□ 0.53
NPAS4Q8IUM7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NPAS4Q8IUM7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPAS4Q8IUM7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.39■□□□□ 0.53
NPAS4Q8IUM7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
NPAS4Q8IUM7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NPAS4Q8IUM7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.39■□□□□ 0.53
NPAS4Q8IUM7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NPAS4Q8IUM7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NPAS4Q8IUM7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.39■□□□□ 0.53
NPAS4Q8IUM7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.39■□□□□ 0.53
NPAS4Q8IUM7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NPAS4Q8IUM7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPAS4Q8IUM7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS4Q8IUM7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms