Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 SPDYE21P-201ENST00000413323 827 ntBASIC18.34■□□□□ 0.53
RNF135Q8IUD6 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 IGHV3-65-201ENST00000523210 341 ntBASIC18.34■□□□□ 0.53
RNF135Q8IUD6 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 AC004877.2-201ENST00000623941 599 ntBASIC18.34■□□□□ 0.53
RNF135Q8IUD6 Z92544.3-201ENST00000624747 417 ntBASIC18.34■□□□□ 0.53
RNF135Q8IUD6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF135Q8IUD6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.33■□□□□ 0.53
RNF135Q8IUD6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF135Q8IUD6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF135Q8IUD6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF135Q8IUD6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RNF135Q8IUD6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF135Q8IUD6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF135Q8IUD6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RNF135Q8IUD6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RNF135Q8IUD6 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.33■□□□□ 0.53
RNF135Q8IUD6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF135Q8IUD6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
RNF135Q8IUD6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.33■□□□□ 0.53
RNF135Q8IUD6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RNF135Q8IUD6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.33■□□□□ 0.53
RNF135Q8IUD6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
RNF135Q8IUD6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF135Q8IUD6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF135Q8IUD6 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.33■□□□□ 0.53
RNF135Q8IUD6 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RNF135Q8IUD6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF135Q8IUD6 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF135Q8IUD6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF135Q8IUD6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
RNF135Q8IUD6 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.33■□□□□ 0.52
RNF135Q8IUD6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.33■□□□□ 0.52
RNF135Q8IUD6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF135Q8IUD6 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.33■□□□□ 0.52
RNF135Q8IUD6 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.33■□□□□ 0.52
RNF135Q8IUD6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF135Q8IUD6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
RNF135Q8IUD6 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
RNF135Q8IUD6 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF135Q8IUD6 AC008667.4-201ENST00000607370 168 ntBASIC18.33■□□□□ 0.52
RNF135Q8IUD6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.33■□□□□ 0.52
RNF135Q8IUD6 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
RNF135Q8IUD6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF135Q8IUD6 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF135Q8IUD6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF135Q8IUD6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF135Q8IUD6 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF135Q8IUD6 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.33■□□□□ 0.52
RNF135Q8IUD6 AC068880.1-201ENST00000507289 2297 ntBASIC18.33■□□□□ 0.52
RNF135Q8IUD6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF135Q8IUD6 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RNF135Q8IUD6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF135Q8IUD6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF135Q8IUD6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF135Q8IUD6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF135Q8IUD6 KRT8P47-201ENST00000604727 1398 ntBASIC18.32■□□□□ 0.52
RNF135Q8IUD6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF135Q8IUD6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.32■□□□□ 0.52
RNF135Q8IUD6 AC093010.1-201ENST00000473625 1624 ntBASIC18.32■□□□□ 0.52
RNF135Q8IUD6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RNF135Q8IUD6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF135Q8IUD6 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF135Q8IUD6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.32■□□□□ 0.52
RNF135Q8IUD6 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RNF135Q8IUD6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RNF135Q8IUD6 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF135Q8IUD6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.32■□□□□ 0.52
RNF135Q8IUD6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RNF135Q8IUD6 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.32■□□□□ 0.52
RNF135Q8IUD6 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.32■□□□□ 0.52
RNF135Q8IUD6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
RNF135Q8IUD6 AD001527.2-201ENST00000622994 785 ntBASIC18.32■□□□□ 0.52
RNF135Q8IUD6 AL513210.1-201ENST00000629608 234 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms