Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.03■□□□□ 0.32
SYVN1Q86TM6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.03■□□□□ 0.32
SYVN1Q86TM6 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.03■□□□□ 0.32
SYVN1Q86TM6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
SYVN1Q86TM6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SYVN1Q86TM6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYVN1Q86TM6 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYVN1Q86TM6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SYVN1Q86TM6 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYVN1Q86TM6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SYVN1Q86TM6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYVN1Q86TM6 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.03■□□□□ 0.32
SYVN1Q86TM6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SYVN1Q86TM6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.03■□□□□ 0.32
SYVN1Q86TM6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 MRPL3P1-201ENST00000400109 1033 ntBASIC17.02■□□□□ 0.32
SYVN1Q86TM6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 BNIP3P18-201ENST00000593976 575 ntBASIC17.02■□□□□ 0.32
SYVN1Q86TM6 AL591684.3-201ENST00000605187 298 ntBASIC17.02■□□□□ 0.32
SYVN1Q86TM6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYVN1Q86TM6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.02■□□□□ 0.31
SYVN1Q86TM6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.02■□□□□ 0.31
SYVN1Q86TM6 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SYVN1Q86TM6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SYVN1Q86TM6 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SYVN1Q86TM6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SYVN1Q86TM6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.02■□□□□ 0.31
SYVN1Q86TM6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.02■□□□□ 0.31
SYVN1Q86TM6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SYVN1Q86TM6 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SYVN1Q86TM6 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.02■□□□□ 0.31
SYVN1Q86TM6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SYVN1Q86TM6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SYVN1Q86TM6 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.02■□□□□ 0.31
SYVN1Q86TM6 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 AC096582.2-201ENST00000510860 516 ntBASIC17.01■□□□□ 0.31
SYVN1Q86TM6 AF238378.1-201ENST00000526806 358 ntBASIC17.01■□□□□ 0.31
SYVN1Q86TM6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 AC114341.1-201ENST00000618070 349 ntBASIC17.01■□□□□ 0.31
SYVN1Q86TM6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYVN1Q86TM6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17■□□□□ 0.31
SYVN1Q86TM6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms