Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 C20orf181-201ENST00000623918 480 ntBASIC18.43■□□□□ 0.54
DCLRE1AQ6PJP8 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DCLRE1AQ6PJP8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
DCLRE1AQ6PJP8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DCLRE1AQ6PJP8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
DCLRE1AQ6PJP8 BCAR1-209ENST00000546196 1340 ntBASIC18.43■□□□□ 0.54
DCLRE1AQ6PJP8 AC068880.1-201ENST00000507289 2297 ntBASIC18.43■□□□□ 0.54
DCLRE1AQ6PJP8 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
DCLRE1AQ6PJP8 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DCLRE1AQ6PJP8 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.43■□□□□ 0.54
DCLRE1AQ6PJP8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
DCLRE1AQ6PJP8 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
DCLRE1AQ6PJP8 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
DCLRE1AQ6PJP8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
DCLRE1AQ6PJP8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
DCLRE1AQ6PJP8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
DCLRE1AQ6PJP8 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
DCLRE1AQ6PJP8 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.42■□□□□ 0.54
DCLRE1AQ6PJP8 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.42■□□□□ 0.54
DCLRE1AQ6PJP8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
DCLRE1AQ6PJP8 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.42■□□□□ 0.54
DCLRE1AQ6PJP8 FAM185BP-201ENST00000443595 716 ntBASIC18.42■□□□□ 0.54
DCLRE1AQ6PJP8 KRT19P2-202ENST00000557173 1012 ntBASIC18.42■□□□□ 0.54
DCLRE1AQ6PJP8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.42■□□□□ 0.54
DCLRE1AQ6PJP8 AC023141.13-201ENST00000604991 943 ntBASIC18.42■□□□□ 0.54
DCLRE1AQ6PJP8 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.42■□□□□ 0.54
DCLRE1AQ6PJP8 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
DCLRE1AQ6PJP8 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
DCLRE1AQ6PJP8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
DCLRE1AQ6PJP8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.42■□□□□ 0.54
DCLRE1AQ6PJP8 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DCLRE1AQ6PJP8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DCLRE1AQ6PJP8 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
DCLRE1AQ6PJP8 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DCLRE1AQ6PJP8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.42■□□□□ 0.54
DCLRE1AQ6PJP8 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DCLRE1AQ6PJP8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
DCLRE1AQ6PJP8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
DCLRE1AQ6PJP8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 AC211486.1-202ENST00000416371 468 ntBASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 AC211476.1-201ENST00000503899 468 ntBASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 PDPK2P-202ENST00000562415 1191 ntBASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 AL133373.2-201ENST00000623187 2828 ntBASIC18.41■□□□□ 0.54
DCLRE1AQ6PJP8 AC025580.3-201ENST00000617932 1424 ntBASIC18.4■□□□□ 0.54
DCLRE1AQ6PJP8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
DCLRE1AQ6PJP8 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DCLRE1AQ6PJP8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DCLRE1AQ6PJP8 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DCLRE1AQ6PJP8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DCLRE1AQ6PJP8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.4■□□□□ 0.54
DCLRE1AQ6PJP8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DCLRE1AQ6PJP8 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.4■□□□□ 0.54
DCLRE1AQ6PJP8 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
DCLRE1AQ6PJP8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DCLRE1AQ6PJP8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DCLRE1AQ6PJP8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DCLRE1AQ6PJP8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
DCLRE1AQ6PJP8 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
DCLRE1AQ6PJP8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
DCLRE1AQ6PJP8 YBX1P5-201ENST00000509441 847 ntBASIC18.4■□□□□ 0.54
DCLRE1AQ6PJP8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.4■□□□□ 0.54
DCLRE1AQ6PJP8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DCLRE1AQ6PJP8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.4■□□□□ 0.54
DCLRE1AQ6PJP8 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
DCLRE1AQ6PJP8 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DCLRE1AQ6PJP8 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DCLRE1AQ6PJP8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DCLRE1AQ6PJP8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
DCLRE1AQ6PJP8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.4■□□□□ 0.54
DCLRE1AQ6PJP8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
DCLRE1AQ6PJP8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms