Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGCS1Q01581 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HMGCS1Q01581 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HMGCS1Q01581 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGCS1Q01581 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
HMGCS1Q01581 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.69■□□□□ 0.26
HMGCS1Q01581 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMGCS1Q01581 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGCS1Q01581 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGCS1Q01581 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGCS1Q01581 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGCS1Q01581 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.69■□□□□ 0.26
HMGCS1Q01581 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.69■□□□□ 0.26
HMGCS1Q01581 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.69■□□□□ 0.26
HMGCS1Q01581 TSSC2-201ENST00000450217 709 ntBASIC16.69■□□□□ 0.26
HMGCS1Q01581 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.69■□□□□ 0.26
HMGCS1Q01581 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.69■□□□□ 0.26
HMGCS1Q01581 AC009533.2-201ENST00000543664 586 ntBASIC16.69■□□□□ 0.26
HMGCS1Q01581 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMGCS1Q01581 AC116407.4-201ENST00000623319 1061 ntBASIC16.69■□□□□ 0.26
HMGCS1Q01581 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMGCS1Q01581 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.69■□□□□ 0.26
HMGCS1Q01581 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGCS1Q01581 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGCS1Q01581 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
HMGCS1Q01581 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGCS1Q01581 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.69■□□□□ 0.26
HMGCS1Q01581 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HMGCS1Q01581 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGCS1Q01581 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGCS1Q01581 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HMGCS1Q01581 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.69■□□□□ 0.26
HMGCS1Q01581 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGCS1Q01581 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
HMGCS1Q01581 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGCS1Q01581 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.69■□□□□ 0.26
HMGCS1Q01581 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.69■□□□□ 0.26
HMGCS1Q01581 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGCS1Q01581 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCS1Q01581 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCS1Q01581 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HMGCS1Q01581 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCS1Q01581 AL353593.2-201ENST00000602529 1483 ntBASIC16.68■□□□□ 0.26
HMGCS1Q01581 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCS1Q01581 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCS1Q01581 AC233702.3-201ENST00000578656 1387 ntBASIC16.68■□□□□ 0.26
HMGCS1Q01581 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCS1Q01581 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCS1Q01581 FLJ38576-201ENST00000623820 2459 ntBASIC16.68■□□□□ 0.26
HMGCS1Q01581 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCS1Q01581 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
HMGCS1Q01581 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.68■□□□□ 0.26
HMGCS1Q01581 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCS1Q01581 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCS1Q01581 AP002383.4-201ENST00000442518 975 ntBASIC16.68■□□□□ 0.26
HMGCS1Q01581 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.68■□□□□ 0.26
HMGCS1Q01581 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.68■□□□□ 0.26
HMGCS1Q01581 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.68■□□□□ 0.26
HMGCS1Q01581 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCS1Q01581 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.68■□□□□ 0.26
HMGCS1Q01581 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.68■□□□□ 0.26
HMGCS1Q01581 AC092068.3-201ENST00000587894 2016 ntBASIC16.68■□□□□ 0.26
HMGCS1Q01581 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCS1Q01581 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
HMGCS1Q01581 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCS1Q01581 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCS1Q01581 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCS1Q01581 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.67■□□□□ 0.26
HMGCS1Q01581 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCS1Q01581 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCS1Q01581 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.67■□□□□ 0.26
HMGCS1Q01581 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCS1Q01581 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.67■□□□□ 0.26
HMGCS1Q01581 IER3-202ENST00000376377 1350 ntBASIC16.67■□□□□ 0.26
HMGCS1Q01581 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCS1Q01581 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
HMGCS1Q01581 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCS1Q01581 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.67■□□□□ 0.26
HMGCS1Q01581 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.67■□□□□ 0.26
HMGCS1Q01581 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCS1Q01581 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCS1Q01581 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCS1Q01581 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HMGCS1Q01581 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.67■□□□□ 0.26
HMGCS1Q01581 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.67■□□□□ 0.26
HMGCS1Q01581 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HMGCS1Q01581 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.67■□□□□ 0.26
HMGCS1Q01581 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
HMGCS1Q01581 AC011467.2-201ENST00000598425 242 ntBASIC16.67■□□□□ 0.26
HMGCS1Q01581 AC091076.1-201ENST00000610741 619 ntBASIC16.67■□□□□ 0.26
HMGCS1Q01581 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HMGCS1Q01581 AP000550.4-202ENST00000639755 178 ntBASIC16.67■□□□□ 0.26
HMGCS1Q01581 AC132938.5-201ENST00000624980 1813 ntBASIC16.67■□□□□ 0.26
HMGCS1Q01581 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HMGCS1Q01581 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCS1Q01581 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCS1Q01581 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCS1Q01581 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCS1Q01581 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HMGCS1Q01581 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms