Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCNA1P78396 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCNA1P78396 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCNA1P78396 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CCNA1P78396 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCNA1P78396 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCNA1P78396 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCNA1P78396 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.55■□□□□ 0.72
CCNA1P78396 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCNA1P78396 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.55■□□□□ 0.72
CCNA1P78396 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.55■□□□□ 0.72
CCNA1P78396 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCNA1P78396 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCNA1P78396 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CCNA1P78396 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCNA1P78396 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.55■□□□□ 0.72
CCNA1P78396 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.55■□□□□ 0.72
CCNA1P78396 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.55■□□□□ 0.72
CCNA1P78396 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.55■□□□□ 0.72
CCNA1P78396 AC069262.1-201ENST00000539058 672 ntBASIC19.55■□□□□ 0.72
CCNA1P78396 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCNA1P78396 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCNA1P78396 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCNA1P78396 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CCNA1P78396 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.55■□□□□ 0.72
CCNA1P78396 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCNA1P78396 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCNA1P78396 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.54■□□□□ 0.72
CCNA1P78396 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.54■□□□□ 0.72
CCNA1P78396 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.54■□□□□ 0.72
CCNA1P78396 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.54■□□□□ 0.72
CCNA1P78396 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
CCNA1P78396 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCNA1P78396 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCNA1P78396 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCNA1P78396 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCNA1P78396 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.54■□□□□ 0.72
CCNA1P78396 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCNA1P78396 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCNA1P78396 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.54■□□□□ 0.72
CCNA1P78396 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCNA1P78396 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.54■□□□□ 0.72
CCNA1P78396 BASP1P1-201ENST00000430708 665 ntBASIC19.54■□□□□ 0.72
CCNA1P78396 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.54■□□□□ 0.72
CCNA1P78396 INGX-202ENST00000489074 768 ntBASIC19.54■□□□□ 0.72
CCNA1P78396 IGHV3-62-201ENST00000520057 340 ntBASIC19.54■□□□□ 0.72
CCNA1P78396 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.54■□□□□ 0.72
CCNA1P78396 DUX4L17-201ENST00000557360 1267 ntBASIC19.54■□□□□ 0.72
CCNA1P78396 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.54■□□□□ 0.72
CCNA1P78396 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.54■□□□□ 0.72
CCNA1P78396 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCNA1P78396 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CCNA1P78396 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCNA1P78396 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCNA1P78396 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCNA1P78396 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCNA1P78396 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCNA1P78396 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.54■□□□□ 0.72
CCNA1P78396 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.54■□□□□ 0.72
CCNA1P78396 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
CCNA1P78396 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCNA1P78396 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCNA1P78396 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCNA1P78396 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.54■□□□□ 0.72
CCNA1P78396 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCNA1P78396 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CCNA1P78396 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.53■□□□□ 0.72
CCNA1P78396 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCNA1P78396 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCNA1P78396 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CCNA1P78396 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CCNA1P78396 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.53■□□□□ 0.72
CCNA1P78396 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CCNA1P78396 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCNA1P78396 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CCNA1P78396 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.53■□□□□ 0.72
CCNA1P78396 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCNA1P78396 HMGA1P7-201ENST00000406908 502 ntBASIC19.53■□□□□ 0.72
CCNA1P78396 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.53■□□□□ 0.72
CCNA1P78396 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCNA1P78396 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.53■□□□□ 0.72
CCNA1P78396 AC190387.1-201ENST00000551683 408 ntBASIC19.53■□□□□ 0.72
CCNA1P78396 AC051619.7-201ENST00000568314 623 ntBASIC19.53■□□□□ 0.72
CCNA1P78396 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCNA1P78396 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.53■□□□□ 0.72
CCNA1P78396 AL390955.2-201ENST00000603032 514 ntBASIC19.53■□□□□ 0.72
CCNA1P78396 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCNA1P78396 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCNA1P78396 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CCNA1P78396 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CCNA1P78396 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CCNA1P78396 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CCNA1P78396 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCNA1P78396 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCNA1P78396 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.53■□□□□ 0.72
CCNA1P78396 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CCNA1P78396 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CCNA1P78396 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.53■□□□□ 0.72
CCNA1P78396 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.53■□□□□ 0.72
CCNA1P78396 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms