Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NUBP1P53384 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NUBP1P53384 AC104794.3-201ENST00000566840 1248 ntBASIC17.18■□□□□ 0.34
NUBP1P53384 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.18■□□□□ 0.34
NUBP1P53384 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.18■□□□□ 0.34
NUBP1P53384 ZNF93-205ENST00000591366 590 ntTSL 3 BASIC17.18■□□□□ 0.34
NUBP1P53384 AC073578.4-201ENST00000623945 514 ntBASIC17.18■□□□□ 0.34
NUBP1P53384 AP002371.2-201ENST00000624450 503 ntBASIC17.18■□□□□ 0.34
NUBP1P53384 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NUBP1P53384 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
NUBP1P53384 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NUBP1P53384 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NUBP1P53384 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NUBP1P53384 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NUBP1P53384 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.18■□□□□ 0.34
NUBP1P53384 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.18■□□□□ 0.34
NUBP1P53384 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.18■□□□□ 0.34
NUBP1P53384 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.18■□□□□ 0.34
NUBP1P53384 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.18■□□□□ 0.34
NUBP1P53384 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.17■□□□□ 0.34
NUBP1P53384 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
NUBP1P53384 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
NUBP1P53384 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NUBP1P53384 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NUBP1P53384 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NUBP1P53384 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NUBP1P53384 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NUBP1P53384 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NUBP1P53384 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NUBP1P53384 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
NUBP1P53384 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NUBP1P53384 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
NUBP1P53384 ETFRF1-201ENST00000381356 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NUBP1P53384 AC087499.6-201ENST00000411576 835 ntBASIC17.17■□□□□ 0.34
NUBP1P53384 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.17■□□□□ 0.34
NUBP1P53384 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NUBP1P53384 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
NUBP1P53384 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.17■□□□□ 0.34
NUBP1P53384 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC17.17■□□□□ 0.34
NUBP1P53384 HLA-V-204ENST00000476601 1289 ntBASIC17.17■□□□□ 0.34
NUBP1P53384 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC17.17■□□□□ 0.34
NUBP1P53384 API5-211ENST00000534695 560 ntTSL 5 BASIC17.17■□□□□ 0.34
NUBP1P53384 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.17■□□□□ 0.34
NUBP1P53384 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.17■□□□□ 0.34
NUBP1P53384 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.17■□□□□ 0.34
NUBP1P53384 RAB43P1-201ENST00000561790 589 ntBASIC17.17■□□□□ 0.34
NUBP1P53384 MIR4525-201ENST00000580000 75 ntBASIC17.17■□□□□ 0.34
NUBP1P53384 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.17■□□□□ 0.34
NUBP1P53384 MIR4453-201ENST00000584019 89 ntBASIC17.17■□□□□ 0.34
NUBP1P53384 BNIP3P39-201ENST00000601077 554 ntBASIC17.17■□□□□ 0.34
NUBP1P53384 AL009183.1-201ENST00000603760 355 ntBASIC17.17■□□□□ 0.34
NUBP1P53384 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.17■□□□□ 0.34
NUBP1P53384 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.17■□□□□ 0.34
NUBP1P53384 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NUBP1P53384 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NUBP1P53384 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NUBP1P53384 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
NUBP1P53384 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NUBP1P53384 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NUBP1P53384 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
NUBP1P53384 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NUBP1P53384 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NUBP1P53384 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NUBP1P53384 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NUBP1P53384 MIR658-201ENST00000385210 100 ntBASIC17.16■□□□□ 0.34
NUBP1P53384 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.16■□□□□ 0.34
NUBP1P53384 PSG5-207ENST00000407568 1064 ntTSL 2 BASIC17.16■□□□□ 0.34
NUBP1P53384 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.16■□□□□ 0.34
NUBP1P53384 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.16■□□□□ 0.34
NUBP1P53384 AC002076.1-201ENST00000435257 527 ntTSL 2 BASIC17.16■□□□□ 0.34
NUBP1P53384 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NUBP1P53384 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.16■□□□□ 0.34
NUBP1P53384 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
NUBP1P53384 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.16■□□□□ 0.34
NUBP1P53384 RNF139-AS1-202ENST00000519861 359 ntTSL 3 BASIC17.16■□□□□ 0.34
NUBP1P53384 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.16■□□□□ 0.34
NUBP1P53384 KRT17P8-201ENST00000540749 863 ntBASIC17.16■□□□□ 0.34
NUBP1P53384 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.16■□□□□ 0.34
NUBP1P53384 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.16■□□□□ 0.34
NUBP1P53384 AP000842.3-202ENST00000569238 1080 ntBASIC17.16■□□□□ 0.34
NUBP1P53384 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.16■□□□□ 0.34
NUBP1P53384 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NUBP1P53384 IGHV3-72-202ENST00000621503 303 ntBASIC17.16■□□□□ 0.34
NUBP1P53384 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.16■□□□□ 0.34
NUBP1P53384 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.16■□□□□ 0.34
NUBP1P53384 AC007541.1-201ENST00000570282 1469 ntBASIC17.16■□□□□ 0.34
NUBP1P53384 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.16■□□□□ 0.34
NUBP1P53384 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.16■□□□□ 0.34
NUBP1P53384 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
NUBP1P53384 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NUBP1P53384 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.16■□□□□ 0.34
NUBP1P53384 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.16■□□□□ 0.34
NUBP1P53384 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.16■□□□□ 0.34
NUBP1P53384 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.15■□□□□ 0.34
NUBP1P53384 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUBP1P53384 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NUBP1P53384 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NUBP1P53384 WASH6P-202ENST00000359512 1437 ntBASIC17.15■□□□□ 0.34
NUBP1P53384 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.15■□□□□ 0.34
NUBP1P53384 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms