Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDX1P52945 AC003669.1-201ENST00000334569 611 ntBASIC16.81■□□□□ 0.28
PDX1P52945 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PDX1P52945 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.81■□□□□ 0.28
PDX1P52945 CRYGEP-201ENST00000412192 528 ntBASIC16.81■□□□□ 0.28
PDX1P52945 VN2R19P-201ENST00000442399 1052 ntBASIC16.81■□□□□ 0.28
PDX1P52945 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.81■□□□□ 0.28
PDX1P52945 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.81■□□□□ 0.28
PDX1P52945 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
PDX1P52945 AC005829.1-201ENST00000570002 483 ntBASIC16.81■□□□□ 0.28
PDX1P52945 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.81■□□□□ 0.28
PDX1P52945 MIR4469-201ENST00000583919 79 ntBASIC16.81■□□□□ 0.28
PDX1P52945 AL596442.2-201ENST00000610240 980 ntBASIC16.81■□□□□ 0.28
PDX1P52945 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDX1P52945 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDX1P52945 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDX1P52945 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDX1P52945 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDX1P52945 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDX1P52945 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDX1P52945 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDX1P52945 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDX1P52945 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDX1P52945 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDX1P52945 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.81■□□□□ 0.28
PDX1P52945 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDX1P52945 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.81■□□□□ 0.28
PDX1P52945 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
PDX1P52945 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDX1P52945 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PDX1P52945 AC100803.2-201ENST00000562459 1963 ntBASIC16.8■□□□□ 0.28
PDX1P52945 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PDX1P52945 GNAS-203ENST00000306120 1878 ntBASIC16.8■□□□□ 0.28
PDX1P52945 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.8■□□□□ 0.28
PDX1P52945 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDX1P52945 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.8■□□□□ 0.28
PDX1P52945 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.8■□□□□ 0.28
PDX1P52945 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDX1P52945 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDX1P52945 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDX1P52945 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDX1P52945 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDX1P52945 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDX1P52945 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PDX1P52945 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDX1P52945 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.8■□□□□ 0.28
PDX1P52945 IGLL3P-201ENST00000412472 434 ntBASIC16.8■□□□□ 0.28
PDX1P52945 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PDX1P52945 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.8■□□□□ 0.28
PDX1P52945 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
PDX1P52945 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PDX1P52945 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.8■□□□□ 0.28
PDX1P52945 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.8■□□□□ 0.28
PDX1P52945 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.8■□□□□ 0.28
PDX1P52945 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
PDX1P52945 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.8■□□□□ 0.28
PDX1P52945 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.8■□□□□ 0.28
PDX1P52945 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.8■□□□□ 0.28
PDX1P52945 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.8■□□□□ 0.28
PDX1P52945 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.8■□□□□ 0.28
PDX1P52945 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDX1P52945 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDX1P52945 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDX1P52945 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDX1P52945 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDX1P52945 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDX1P52945 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDX1P52945 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDX1P52945 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDX1P52945 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PDX1P52945 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.8■□□□□ 0.28
PDX1P52945 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDX1P52945 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDX1P52945 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDX1P52945 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDX1P52945 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDX1P52945 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDX1P52945 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDX1P52945 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDX1P52945 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDX1P52945 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDX1P52945 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDX1P52945 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDX1P52945 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PDX1P52945 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDX1P52945 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDX1P52945 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.79■□□□□ 0.28
PDX1P52945 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDX1P52945 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDX1P52945 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.79■□□□□ 0.28
PDX1P52945 METTL21AP1-201ENST00000438852 635 ntBASIC16.79■□□□□ 0.28
PDX1P52945 PRSS29P-201ENST00000440800 595 ntBASIC16.79■□□□□ 0.28
PDX1P52945 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.79■□□□□ 0.28
PDX1P52945 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.79■□□□□ 0.28
PDX1P52945 AC004790.2-201ENST00000623588 572 ntBASIC16.79■□□□□ 0.28
PDX1P52945 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.79■□□□□ 0.28
PDX1P52945 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PDX1P52945 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDX1P52945 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PDX1P52945 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms