Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MTHFRP42898 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.05■□□□□ 0.48
MTHFRP42898 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.05■□□□□ 0.48
MTHFRP42898 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MTHFRP42898 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.05■□□□□ 0.48
MTHFRP42898 AC093520.2-201ENST00000561830 333 ntBASIC18.05■□□□□ 0.48
MTHFRP42898 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.05■□□□□ 0.48
MTHFRP42898 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
MTHFRP42898 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.05■□□□□ 0.48
MTHFRP42898 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
MTHFRP42898 Z92544.3-201ENST00000624747 417 ntBASIC18.05■□□□□ 0.48
MTHFRP42898 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
MTHFRP42898 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MTHFRP42898 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
MTHFRP42898 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.05■□□□□ 0.48
MTHFRP42898 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.05■□□□□ 0.48
MTHFRP42898 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MTHFRP42898 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
MTHFRP42898 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MTHFRP42898 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
MTHFRP42898 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MTHFRP42898 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.04■□□□□ 0.48
MTHFRP42898 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MTHFRP42898 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MTHFRP42898 PCDHB18P-201ENST00000524813 2368 ntBASIC18.04■□□□□ 0.48
MTHFRP42898 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MTHFRP42898 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MTHFRP42898 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MTHFRP42898 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
MTHFRP42898 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MTHFRP42898 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
MTHFRP42898 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.04■□□□□ 0.48
MTHFRP42898 AC005237.2-201ENST00000434368 219 ntBASIC18.04■□□□□ 0.48
MTHFRP42898 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.04■□□□□ 0.48
MTHFRP42898 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MTHFRP42898 AC093214.1-201ENST00000511688 1107 ntBASIC18.04■□□□□ 0.48
MTHFRP42898 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.04■□□□□ 0.48
MTHFRP42898 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.04■□□□□ 0.48
MTHFRP42898 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MTHFRP42898 ACTL9-202ENST00000612068 1252 ntBASIC18.04■□□□□ 0.48
MTHFRP42898 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.04■□□□□ 0.48
MTHFRP42898 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MTHFRP42898 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MTHFRP42898 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MTHFRP42898 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
MTHFRP42898 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
MTHFRP42898 AC009949.1-201ENST00000623048 1830 ntBASIC18.04■□□□□ 0.48
MTHFRP42898 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
MTHFRP42898 BICD1-207ENST00000551848 1962 ntBASIC18.04■□□□□ 0.48
MTHFRP42898 AL096828.2-201ENST00000567259 1965 ntBASIC18.04■□□□□ 0.48
MTHFRP42898 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MTHFRP42898 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MTHFRP42898 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MTHFRP42898 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MTHFRP42898 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
MTHFRP42898 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MTHFRP42898 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MTHFRP42898 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.03■□□□□ 0.48
MTHFRP42898 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MTHFRP42898 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
MTHFRP42898 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MTHFRP42898 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.03■□□□□ 0.48
MTHFRP42898 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.03■□□□□ 0.48
MTHFRP42898 AL671277.1-201ENST00000429656 993 ntBASIC18.03■□□□□ 0.48
MTHFRP42898 CNN2P2-201ENST00000443536 909 ntBASIC18.03■□□□□ 0.48
MTHFRP42898 CNN2P3-201ENST00000450201 906 ntBASIC18.03■□□□□ 0.48
MTHFRP42898 SPDYE11-202ENST00000450699 704 ntBASIC18.03■□□□□ 0.48
MTHFRP42898 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.03■□□□□ 0.48
MTHFRP42898 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.03■□□□□ 0.48
MTHFRP42898 INGX-202ENST00000489074 768 ntBASIC18.03■□□□□ 0.48
MTHFRP42898 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.03■□□□□ 0.48
MTHFRP42898 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.03■□□□□ 0.48
MTHFRP42898 SPDYE9P-201ENST00000570642 692 ntBASIC18.03■□□□□ 0.48
MTHFRP42898 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.03■□□□□ 0.48
MTHFRP42898 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.03■□□□□ 0.48
MTHFRP42898 SPDYE10P-202ENST00000612005 668 ntBASIC18.03■□□□□ 0.48
MTHFRP42898 SPDYE8P-202ENST00000612377 668 ntBASIC18.03■□□□□ 0.48
MTHFRP42898 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.03■□□□□ 0.48
MTHFRP42898 AL136317.3-201ENST00000618497 906 ntBASIC18.03■□□□□ 0.48
MTHFRP42898 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MTHFRP42898 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MTHFRP42898 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MTHFRP42898 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MTHFRP42898 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MTHFRP42898 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.03■□□□□ 0.48
MTHFRP42898 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MTHFRP42898 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
MTHFRP42898 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MTHFRP42898 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MTHFRP42898 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
MTHFRP42898 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MTHFRP42898 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MTHFRP42898 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MTHFRP42898 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MTHFRP42898 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MTHFRP42898 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
MTHFRP42898 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
MTHFRP42898 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MTHFRP42898 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MTHFRP42898 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms