Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFC4P35249 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RFC4P35249 GNAS-203ENST00000306120 1878 ntBASIC21.56■■□□□ 1.04
RFC4P35249 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.56■■□□□ 1.04
RFC4P35249 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFC4P35249 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFC4P35249 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
RFC4P35249 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFC4P35249 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFC4P35249 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RFC4P35249 GRAP-202ENST00000395635 834 ntTSL 2 BASIC21.56■■□□□ 1.04
RFC4P35249 ALG1L8P-201ENST00000533887 760 ntBASIC21.56■■□□□ 1.04
RFC4P35249 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.56■■□□□ 1.04
RFC4P35249 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
RFC4P35249 AC027307.3-201ENST00000594262 1100 ntBASIC21.56■■□□□ 1.04
RFC4P35249 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC21.56■■□□□ 1.04
RFC4P35249 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RFC4P35249 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.56■■□□□ 1.04
RFC4P35249 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFC4P35249 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RFC4P35249 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFC4P35249 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFC4P35249 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
RFC4P35249 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
RFC4P35249 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFC4P35249 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC21.55■■□□□ 1.04
RFC4P35249 FLJ13224-201ENST00000313737 1514 ntBASIC21.55■■□□□ 1.04
RFC4P35249 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFC4P35249 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFC4P35249 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFC4P35249 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC21.55■■□□□ 1.04
RFC4P35249 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC21.55■■□□□ 1.04
RFC4P35249 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RFC4P35249 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC21.55■■□□□ 1.04
RFC4P35249 AC109635.5-201ENST00000533593 962 ntBASIC21.55■■□□□ 1.04
RFC4P35249 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC21.55■■□□□ 1.04
RFC4P35249 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC21.55■■□□□ 1.04
RFC4P35249 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RFC4P35249 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RFC4P35249 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RFC4P35249 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFC4P35249 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RFC4P35249 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
RFC4P35249 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFC4P35249 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFC4P35249 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFC4P35249 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFC4P35249 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFC4P35249 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFC4P35249 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
RFC4P35249 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFC4P35249 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFC4P35249 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RFC4P35249 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFC4P35249 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFC4P35249 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC21.54■■□□□ 1.04
RFC4P35249 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.54■■□□□ 1.04
RFC4P35249 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFC4P35249 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFC4P35249 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFC4P35249 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC21.54■■□□□ 1.04
RFC4P35249 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFC4P35249 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFC4P35249 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RFC4P35249 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC21.54■■□□□ 1.04
RFC4P35249 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RFC4P35249 AC092580.3-201ENST00000430932 139 ntBASIC21.54■■□□□ 1.04
RFC4P35249 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC21.54■■□□□ 1.04
RFC4P35249 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFC4P35249 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC21.54■■□□□ 1.04
RFC4P35249 AL358472.5-202ENST00000641448 1267 ntBASIC21.54■■□□□ 1.04
RFC4P35249 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFC4P35249 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFC4P35249 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFC4P35249 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFC4P35249 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFC4P35249 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFC4P35249 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC21.54■■□□□ 1.04
RFC4P35249 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.54■■□□□ 1.04
RFC4P35249 WASH6P-202ENST00000359512 1437 ntBASIC21.54■■□□□ 1.04
RFC4P35249 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.54■■□□□ 1.04
RFC4P35249 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFC4P35249 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.54■■□□□ 1.04
RFC4P35249 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RFC4P35249 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFC4P35249 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFC4P35249 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RFC4P35249 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFC4P35249 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RFC4P35249 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC21.53■■□□□ 1.04
RFC4P35249 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.53■■□□□ 1.04
RFC4P35249 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RFC4P35249 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC21.53■■□□□ 1.04
RFC4P35249 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
RFC4P35249 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC21.53■■□□□ 1.04
RFC4P35249 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RFC4P35249 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFC4P35249 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC21.53■■□□□ 1.04
RFC4P35249 COQ6-210ENST00000554920 649 ntTSL 3 BASIC21.53■■□□□ 1.04
RFC4P35249 SSH2-211ENST00000590153 570 ntTSL 4 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms