Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.06■□□□□ 0.32
VARSP26640 AC012615.1-201ENST00000565797 1299 ntBASIC17.06■□□□□ 0.32
VARSP26640 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.06■□□□□ 0.32
VARSP26640 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VARSP26640 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.06■□□□□ 0.32
VARSP26640 IFNL4P1-201ENST00000607083 540 ntBASIC17.06■□□□□ 0.32
VARSP26640 AC244517.3-201ENST00000616254 1235 ntBASIC17.06■□□□□ 0.32
VARSP26640 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.06■□□□□ 0.32
VARSP26640 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
VARSP26640 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VARSP26640 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VARSP26640 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VARSP26640 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
VARSP26640 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
VARSP26640 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VARSP26640 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.06■□□□□ 0.32
VARSP26640 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VARSP26640 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VARSP26640 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VARSP26640 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
VARSP26640 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.06■□□□□ 0.32
VARSP26640 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VARSP26640 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.06■□□□□ 0.32
VARSP26640 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
VARSP26640 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VARSP26640 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VARSP26640 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VARSP26640 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARSP26640 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARSP26640 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VARSP26640 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.05■□□□□ 0.32
VARSP26640 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.05■□□□□ 0.32
VARSP26640 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARSP26640 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.05■□□□□ 0.32
VARSP26640 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VARSP26640 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.05■□□□□ 0.32
VARSP26640 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARSP26640 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARSP26640 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARSP26640 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.05■□□□□ 0.32
VARSP26640 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VARSP26640 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARSP26640 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.05■□□□□ 0.32
VARSP26640 AC007967.3-201ENST00000434308 558 ntBASIC17.05■□□□□ 0.32
VARSP26640 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
VARSP26640 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.05■□□□□ 0.32
VARSP26640 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.05■□□□□ 0.32
VARSP26640 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.05■□□□□ 0.32
VARSP26640 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VARSP26640 AL160237.2-201ENST00000556165 472 ntBASIC17.05■□□□□ 0.32
VARSP26640 TPSP2-201ENST00000561760 610 ntBASIC17.05■□□□□ 0.32
VARSP26640 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.05■□□□□ 0.32
VARSP26640 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARSP26640 AL138831.2-201ENST00000606564 490 ntBASIC17.05■□□□□ 0.32
VARSP26640 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.05■□□□□ 0.32
VARSP26640 LINC01451-201ENST00000623792 534 ntBASIC17.05■□□□□ 0.32
VARSP26640 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
VARSP26640 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.05■□□□□ 0.32
VARSP26640 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VARSP26640 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.05■□□□□ 0.32
VARSP26640 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VARSP26640 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.05■□□□□ 0.32
VARSP26640 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.05■□□□□ 0.32
VARSP26640 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARSP26640 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
VARSP26640 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARSP26640 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARSP26640 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VARSP26640 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
VARSP26640 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARSP26640 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.05■□□□□ 0.32
VARSP26640 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.05■□□□□ 0.32
VARSP26640 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARSP26640 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARSP26640 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VARSP26640 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.04■□□□□ 0.32
VARSP26640 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
VARSP26640 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
VARSP26640 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VARSP26640 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
VARSP26640 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VARSP26640 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
VARSP26640 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
VARSP26640 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VARSP26640 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
VARSP26640 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.04■□□□□ 0.32
VARSP26640 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VARSP26640 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
VARSP26640 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.04■□□□□ 0.32
VARSP26640 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VARSP26640 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VARSP26640 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VARSP26640 AC097374.2-201ENST00000618617 1306 ntBASIC17.04■□□□□ 0.32
VARSP26640 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.04■□□□□ 0.32
VARSP26640 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
VARSP26640 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
VARSP26640 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VARSP26640 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VARSP26640 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
VARSP26640 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms