Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB4AP20338 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB4AP20338 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB4AP20338 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB4AP20338 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB4AP20338 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB4AP20338 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.3□□□□□ -0.28
RAB4AP20338 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB4AP20338 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB4AP20338 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
RAB4AP20338 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.3□□□□□ -0.28
RAB4AP20338 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB4AP20338 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
RAB4AP20338 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB4AP20338 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB4AP20338 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.3□□□□□ -0.28
RAB4AP20338 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB4AP20338 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB4AP20338 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB4AP20338 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB4AP20338 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.3□□□□□ -0.28
RAB4AP20338 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
RAB4AP20338 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
RAB4AP20338 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB4AP20338 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RAB4AP20338 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC13.3□□□□□ -0.28
RAB4AP20338 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC13.3□□□□□ -0.28
RAB4AP20338 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC13.3□□□□□ -0.28
RAB4AP20338 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC13.3□□□□□ -0.28
RAB4AP20338 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC13.3□□□□□ -0.28
RAB4AP20338 OR2A1-AS1-207ENST00000486094 819 ntBASIC13.3□□□□□ -0.28
RAB4AP20338 PRSS44-201ENST00000515154 1146 ntBASIC13.3□□□□□ -0.28
RAB4AP20338 PNMA6B-201ENST00000538162 1200 ntBASIC13.3□□□□□ -0.28
RAB4AP20338 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RAB4AP20338 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC13.3□□□□□ -0.28
RAB4AP20338 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC13.3□□□□□ -0.28
RAB4AP20338 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB4AP20338 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
RAB4AP20338 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB4AP20338 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB4AP20338 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
RAB4AP20338 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB4AP20338 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB4AP20338 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB4AP20338 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB4AP20338 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB4AP20338 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
RAB4AP20338 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC13.3□□□□□ -0.28
RAB4AP20338 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.3□□□□□ -0.28
RAB4AP20338 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC13.3□□□□□ -0.28
RAB4AP20338 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
RAB4AP20338 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB4AP20338 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB4AP20338 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC13.3□□□□□ -0.28
RAB4AP20338 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
RAB4AP20338 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB4AP20338 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB4AP20338 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB4AP20338 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.3□□□□□ -0.28
RAB4AP20338 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB4AP20338 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RAB4AP20338 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB4AP20338 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB4AP20338 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
RAB4AP20338 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB4AP20338 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
RAB4AP20338 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB4AP20338 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.29□□□□□ -0.28
RAB4AP20338 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC13.29□□□□□ -0.28
RAB4AP20338 KRT18P55-202ENST00000578578 1546 ntBASIC13.29□□□□□ -0.28
RAB4AP20338 AC144831.1-201ENST00000573312 2656 ntBASIC13.29□□□□□ -0.28
RAB4AP20338 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB4AP20338 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB4AP20338 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB4AP20338 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB4AP20338 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB4AP20338 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB4AP20338 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
RAB4AP20338 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB4AP20338 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.29□□□□□ -0.28
RAB4AP20338 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB4AP20338 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB4AP20338 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RAB4AP20338 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB4AP20338 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RAB4AP20338 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB4AP20338 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC13.29□□□□□ -0.28
RAB4AP20338 Z85996.1-201ENST00000494644 937 ntBASIC13.29□□□□□ -0.28
RAB4AP20338 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC13.29□□□□□ -0.28
RAB4AP20338 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB4AP20338 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
RAB4AP20338 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB4AP20338 AC092437.1-201ENST00000624794 1048 ntBASIC13.29□□□□□ -0.28
RAB4AP20338 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB4AP20338 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RAB4AP20338 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB4AP20338 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RAB4AP20338 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB4AP20338 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RAB4AP20338 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms