Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.74■□□□□ 0.27
CCNYL3P0C7X3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCNYL3P0C7X3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CCNYL3P0C7X3 AL022326.1-202ENST00000641533 845 ntBASIC16.74■□□□□ 0.27
CCNYL3P0C7X3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CCNYL3P0C7X3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCNYL3P0C7X3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCNYL3P0C7X3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCNYL3P0C7X3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
CCNYL3P0C7X3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.74■□□□□ 0.27
CCNYL3P0C7X3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCNYL3P0C7X3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCNYL3P0C7X3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCNYL3P0C7X3 AC079776.2-201ENST00000641154 1609 ntBASIC16.74■□□□□ 0.27
CCNYL3P0C7X3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCNYL3P0C7X3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
CCNYL3P0C7X3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 MIR1233-2-201ENST00000408138 82 ntBASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 MIR1233-1-201ENST00000408722 82 ntBASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 BX842568.4-201ENST00000421222 227 ntBASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 LAGE3P1-201ENST00000425356 484 ntBASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 DUTP2-201ENST00000519164 463 ntBASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 FAM197Y3-203ENST00000618346 717 ntBASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CCNYL3P0C7X3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 AC124067.4-201ENST00000519691 2379 ntBASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 MED15P5-201ENST00000423150 992 ntBASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 BX005266.1-201ENST00000473402 457 ntBASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 RNA5SP415-201ENST00000517246 115 ntBASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 Z83851.2-201ENST00000609564 659 ntBASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 MIR1199-201ENST00000621445 119 ntBASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 PMPCAP1-201ENST00000508114 1576 ntBASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCNYL3P0C7X3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms