Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINGO3P0C6S8 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.8■□□□□ 0.28
LINGO3P0C6S8 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINGO3P0C6S8 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LINGO3P0C6S8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINGO3P0C6S8 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.8■□□□□ 0.28
LINGO3P0C6S8 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LINGO3P0C6S8 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 AC117947.1-201ENST00000427448 529 ntBASIC16.79■□□□□ 0.28
LINGO3P0C6S8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 RN7SL850P-201ENST00000579959 291 ntBASIC16.79■□□□□ 0.28
LINGO3P0C6S8 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 AC139887.4-201ENST00000607877 719 ntBASIC16.79■□□□□ 0.28
LINGO3P0C6S8 AC006011.2-201ENST00000621313 1158 ntBASIC16.79■□□□□ 0.28
LINGO3P0C6S8 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 SDHAP2-201ENST00000455183 2001 ntBASIC16.79■□□□□ 0.28
LINGO3P0C6S8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.79■□□□□ 0.28
LINGO3P0C6S8 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 AC126177.1-201ENST00000547829 2218 ntBASIC16.78■□□□□ 0.28
LINGO3P0C6S8 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.78■□□□□ 0.28
LINGO3P0C6S8 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 YBX1P2-201ENST00000489612 999 ntBASIC16.78■□□□□ 0.28
LINGO3P0C6S8 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 GCSHP2-201ENST00000560971 527 ntBASIC16.78■□□□□ 0.28
LINGO3P0C6S8 AC140113.3-201ENST00000605663 199 ntBASIC16.78■□□□□ 0.28
LINGO3P0C6S8 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 AC060834.1-201ENST00000443027 2032 ntBASIC16.78■□□□□ 0.28
LINGO3P0C6S8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINGO3P0C6S8 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINGO3P0C6S8 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.77■□□□□ 0.28
LINGO3P0C6S8 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
LINGO3P0C6S8 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINGO3P0C6S8 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.77■□□□□ 0.28
LINGO3P0C6S8 AC079328.2-201ENST00000561241 3354 ntBASIC16.77■□□□□ 0.28
LINGO3P0C6S8 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINGO3P0C6S8 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms