Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
APPP05067 AC107918.4-202ENST00000641623 219 ntBASIC20.78■□□□□ 0.92
APPP05067 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
APPP05067 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APPP05067 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APPP05067 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
APPP05067 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APPP05067 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APPP05067 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.78■□□□□ 0.92
APPP05067 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APPP05067 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
APPP05067 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.78■□□□□ 0.92
APPP05067 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.78■□□□□ 0.92
APPP05067 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
APPP05067 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
APPP05067 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
APPP05067 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.77■□□□□ 0.92
APPP05067 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
APPP05067 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
APPP05067 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
APPP05067 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.77■□□□□ 0.92
APPP05067 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
APPP05067 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.77■□□□□ 0.92
APPP05067 RNA5SP419-201ENST00000515908 135 ntBASIC20.77■□□□□ 0.92
APPP05067 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.77■□□□□ 0.92
APPP05067 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
APPP05067 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
APPP05067 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.77■□□□□ 0.92
APPP05067 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
APPP05067 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.77■□□□□ 0.92
APPP05067 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
APPP05067 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
APPP05067 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
APPP05067 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
APPP05067 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.77■□□□□ 0.92
APPP05067 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
APPP05067 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
APPP05067 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
APPP05067 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
APPP05067 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
APPP05067 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
APPP05067 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.76■□□□□ 0.91
APPP05067 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
APPP05067 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.76■□□□□ 0.91
APPP05067 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.76■□□□□ 0.91
APPP05067 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.76■□□□□ 0.91
APPP05067 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
APPP05067 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.76■□□□□ 0.91
APPP05067 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.76■□□□□ 0.91
APPP05067 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.76■□□□□ 0.91
APPP05067 AL589182.2-201ENST00000619332 1049 ntBASIC20.76■□□□□ 0.91
APPP05067 PCDHB18P-201ENST00000524813 2368 ntBASIC20.76■□□□□ 0.91
APPP05067 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.76■□□□□ 0.91
APPP05067 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.76■□□□□ 0.91
APPP05067 NCF1C-201ENST00000438382 1427 ntBASIC20.76■□□□□ 0.91
APPP05067 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
APPP05067 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.76■□□□□ 0.91
APPP05067 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.76■□□□□ 0.91
APPP05067 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
APPP05067 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
APPP05067 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APPP05067 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APPP05067 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
APPP05067 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APPP05067 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APPP05067 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
APPP05067 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
APPP05067 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
APPP05067 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.75■□□□□ 0.91
APPP05067 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
APPP05067 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
APPP05067 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.75■□□□□ 0.91
APPP05067 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.75■□□□□ 0.91
APPP05067 LAGE3P1-201ENST00000425356 484 ntBASIC20.75■□□□□ 0.91
APPP05067 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.75■□□□□ 0.91
APPP05067 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.75■□□□□ 0.91
APPP05067 AC012640.2-201ENST00000561606 901 ntBASIC20.75■□□□□ 0.91
APPP05067 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.75■□□□□ 0.91
APPP05067 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.75■□□□□ 0.91
APPP05067 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
APPP05067 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APPP05067 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.75■□□□□ 0.91
APPP05067 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.75■□□□□ 0.91
APPP05067 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APPP05067 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
APPP05067 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APPP05067 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APPP05067 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
APPP05067 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
APPP05067 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
APPP05067 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APPP05067 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.74■□□□□ 0.91
APPP05067 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
APPP05067 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.74■□□□□ 0.91
APPP05067 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APPP05067 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
APPP05067 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
APPP05067 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
APPP05067 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
APPP05067 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms