Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SLC28A2O43868 AC002347.1-201ENST00000569543 541 ntBASIC16.72■□□□□ 0.27
SLC28A2O43868 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.72■□□□□ 0.27
SLC28A2O43868 AC011467.4-201ENST00000594891 528 ntBASIC16.72■□□□□ 0.27
SLC28A2O43868 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC28A2O43868 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A2O43868 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A2O43868 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC28A2O43868 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A2O43868 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC28A2O43868 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A2O43868 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SLC28A2O43868 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC28A2O43868 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC28A2O43868 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC28A2O43868 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SLC28A2O43868 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC28A2O43868 AC139713.2-201ENST00000641328 2723 ntBASIC16.71■□□□□ 0.27
SLC28A2O43868 HLA-J-201ENST00000462773 1622 ntBASIC16.71■□□□□ 0.27
SLC28A2O43868 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC28A2O43868 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC28A2O43868 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC28A2O43868 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC28A2O43868 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC28A2O43868 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.71■□□□□ 0.27
SLC28A2O43868 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC28A2O43868 SNHG9-202ENST00000564014 471 ntBASIC16.71■□□□□ 0.27
SLC28A2O43868 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.71■□□□□ 0.27
SLC28A2O43868 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC28A2O43868 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC28A2O43868 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC28A2O43868 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC28A2O43868 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.71■□□□□ 0.27
SLC28A2O43868 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC28A2O43868 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC28A2O43868 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC28A2O43868 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC28A2O43868 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC28A2O43868 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SLC28A2O43868 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC28A2O43868 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC28A2O43868 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.26
SLC28A2O43868 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A2O43868 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A2O43868 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A2O43868 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A2O43868 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC28A2O43868 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A2O43868 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A2O43868 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A2O43868 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC28A2O43868 AL353692.3-201ENST00000407031 1396 ntBASIC16.7■□□□□ 0.26
SLC28A2O43868 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A2O43868 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A2O43868 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A2O43868 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A2O43868 RBM17P3-201ENST00000417687 1192 ntBASIC16.7■□□□□ 0.26
SLC28A2O43868 AC004832.2-201ENST00000426397 482 ntBASIC16.7■□□□□ 0.26
SLC28A2O43868 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.7■□□□□ 0.26
SLC28A2O43868 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A2O43868 AC024563.2-201ENST00000603282 481 ntBASIC16.7■□□□□ 0.26
SLC28A2O43868 AC116407.2-201ENST00000613639 860 ntBASIC16.7■□□□□ 0.26
SLC28A2O43868 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SLC28A2O43868 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.7■□□□□ 0.26
SLC28A2O43868 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A2O43868 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SLC28A2O43868 AC106820.2-201ENST00000563775 3264 ntBASIC16.7■□□□□ 0.26
SLC28A2O43868 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A2O43868 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A2O43868 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A2O43868 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC28A2O43868 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A2O43868 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A2O43868 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SLC28A2O43868 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC28A2O43868 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC28A2O43868 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC28A2O43868 PP12613-201ENST00000424958 2230 ntBASIC16.69■□□□□ 0.26
SLC28A2O43868 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC28A2O43868 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC28A2O43868 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC28A2O43868 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SLC28A2O43868 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SLC28A2O43868 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC28A2O43868 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC28A2O43868 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SLC28A2O43868 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.69■□□□□ 0.26
SLC28A2O43868 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.69■□□□□ 0.26
SLC28A2O43868 AP006288.1-201ENST00000446065 395 ntBASIC16.69■□□□□ 0.26
SLC28A2O43868 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC28A2O43868 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SLC28A2O43868 AC113404.2-201ENST00000507884 177 ntBASIC16.69■□□□□ 0.26
SLC28A2O43868 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.69■□□□□ 0.26
SLC28A2O43868 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.69■□□□□ 0.26
SLC28A2O43868 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC28A2O43868 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC28A2O43868 AC141586.5-201ENST00000624546 2050 ntBASIC16.69■□□□□ 0.26
SLC28A2O43868 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC28A2O43868 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC28A2O43868 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms