Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP2AO43633 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.47■□□□□ 0.71
CHMP2AO43633 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP2AO43633 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2AO43633 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2AO43633 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2AO43633 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2AO43633 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.46■□□□□ 0.71
CHMP2AO43633 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2AO43633 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2AO43633 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2AO43633 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.46■□□□□ 0.71
CHMP2AO43633 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2AO43633 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2AO43633 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CHMP2AO43633 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2AO43633 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CHMP2AO43633 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.46■□□□□ 0.71
CHMP2AO43633 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2AO43633 AC104109.2-201ENST00000602919 1418 ntBASIC19.46■□□□□ 0.71
CHMP2AO43633 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2AO43633 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CHMP2AO43633 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.46■□□□□ 0.71
CHMP2AO43633 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.46■□□□□ 0.71
CHMP2AO43633 RNA5SP415-201ENST00000517246 115 ntBASIC19.46■□□□□ 0.71
CHMP2AO43633 IGHV3-22-201ENST00000520721 359 ntBASIC19.46■□□□□ 0.71
CHMP2AO43633 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2AO43633 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.46■□□□□ 0.71
CHMP2AO43633 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.46■□□□□ 0.71
CHMP2AO43633 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.46■□□□□ 0.71
CHMP2AO43633 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.46■□□□□ 0.71
CHMP2AO43633 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.46■□□□□ 0.71
CHMP2AO43633 AL353135.1-201ENST00000606729 504 ntBASIC19.46■□□□□ 0.71
CHMP2AO43633 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.46■□□□□ 0.71
CHMP2AO43633 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2AO43633 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2AO43633 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2AO43633 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2AO43633 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2AO43633 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2AO43633 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CHMP2AO43633 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2AO43633 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.46■□□□□ 0.71
CHMP2AO43633 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.46■□□□□ 0.71
CHMP2AO43633 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.46■□□□□ 0.71
CHMP2AO43633 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP2AO43633 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.45■□□□□ 0.7
CHMP2AO43633 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CHMP2AO43633 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP2AO43633 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP2AO43633 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CHMP2AO43633 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP2AO43633 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP2AO43633 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CHMP2AO43633 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP2AO43633 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP2AO43633 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP2AO43633 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.45■□□□□ 0.7
CHMP2AO43633 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP2AO43633 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.45■□□□□ 0.7
CHMP2AO43633 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.45■□□□□ 0.7
CHMP2AO43633 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.45■□□□□ 0.7
CHMP2AO43633 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.45■□□□□ 0.7
CHMP2AO43633 AC005593.1-201ENST00000624894 515 ntBASIC19.45■□□□□ 0.7
CHMP2AO43633 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.45■□□□□ 0.7
CHMP2AO43633 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP2AO43633 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.45■□□□□ 0.7
CHMP2AO43633 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP2AO43633 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP2AO43633 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP2AO43633 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP2AO43633 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP2AO43633 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP2AO43633 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CHMP2AO43633 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CHMP2AO43633 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CHMP2AO43633 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP2AO43633 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP2AO43633 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CHMP2AO43633 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP2AO43633 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP2AO43633 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.44■□□□□ 0.7
CHMP2AO43633 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CHMP2AO43633 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP2AO43633 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CHMP2AO43633 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP2AO43633 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP2AO43633 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP2AO43633 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CHMP2AO43633 ACTG1P4-201ENST00000425123 1122 ntBASIC19.44■□□□□ 0.7
CHMP2AO43633 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CHMP2AO43633 UNC93B6-202ENST00000528242 690 ntBASIC19.44■□□□□ 0.7
CHMP2AO43633 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.44■□□□□ 0.7
CHMP2AO43633 CROCCP2-202ENST00000412962 2773 ntBASIC19.44■□□□□ 0.7
CHMP2AO43633 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.44■□□□□ 0.7
CHMP2AO43633 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP2AO43633 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP2AO43633 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP2AO43633 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP2AO43633 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms