Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC27.55■■■□□ 2
CHD1O14646 TPI1-206ENST00000488464 791 ntTSL 5 BASIC27.55■■■□□ 2
CHD1O14646 AL589739.1-201ENST00000607720 493 ntBASIC27.55■■■□□ 2
CHD1O14646 PFAS-212ENST00000625942 396 ntTSL 5 BASIC27.55■■■□□ 2
CHD1O14646 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC27.55■■■□□ 2
CHD1O14646 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC27.55■■■□□ 2
CHD1O14646 AC020907.1-201ENST00000616460 1350 ntBASIC27.55■■■□□ 2
CHD1O14646 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC27.54■■■□□ 2
CHD1O14646 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC27.54■■■□□ 2
CHD1O14646 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC27.54■■■□□ 2
CHD1O14646 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC27.54■■■□□ 2
CHD1O14646 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC27.54■■■□□ 2
CHD1O14646 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC27.54■■■□□ 2
CHD1O14646 AC104989.1-201ENST00000519711 778 ntBASIC27.54■■■□□ 2
CHD1O14646 CTBP2P3-201ENST00000585629 1255 ntBASIC27.54■■■□□ 2
CHD1O14646 AC244093.1-201ENST00000610837 814 ntBASIC27.54■■■□□ 2
CHD1O14646 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC27.54■■■□□ 2
CHD1O14646 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC27.54■■■□□ 2
CHD1O14646 POR-209ENST00000439269 1858 ntTSL 2 BASIC27.54■■■□□ 2
CHD1O14646 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CHD1O14646 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CHD1O14646 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
CHD1O14646 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
CHD1O14646 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CHD1O14646 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC27.53■■■□□ 2
CHD1O14646 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CHD1O14646 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CHD1O14646 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC27.53■■■□□ 2
CHD1O14646 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC27.53■■■□□ 2
CHD1O14646 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC27.53■■■□□ 2
CHD1O14646 RN7SL828P-201ENST00000607615 303 ntBASIC27.53■■■□□ 2
CHD1O14646 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
CHD1O14646 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC27.53■■■□□ 2
CHD1O14646 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC27.53■■■□□ 2
CHD1O14646 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC27.53■■■□□ 2
CHD1O14646 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC27.53■■■□□ 2
CHD1O14646 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CHD1O14646 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
CHD1O14646 PRYP6-201ENST00000514804 343 ntBASIC27.53■■■□□ 2
CHD1O14646 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC27.53■■■□□ 2
CHD1O14646 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC27.52■■■□□ 2
CHD1O14646 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
CHD1O14646 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC27.52■■■□□ 2
CHD1O14646 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC27.52■■■□□ 2
CHD1O14646 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC27.52■■■□□ 2
CHD1O14646 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CHD1O14646 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CHD1O14646 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC27.52■■■□□ 2
CHD1O14646 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC27.52■■■□□ 2
CHD1O14646 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC27.52■■■□□ 2
CHD1O14646 CD81-207ENST00000481687 890 ntTSL 2 BASIC27.52■■■□□ 2
CHD1O14646 DOC2GP-202ENST00000514950 1163 ntBASIC27.52■■■□□ 2
CHD1O14646 AL079307.3-201ENST00000556114 283 ntBASIC27.52■■■□□ 2
CHD1O14646 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC27.52■■■□□ 2
CHD1O14646 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC27.52■■■□□ 2
CHD1O14646 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC27.52■■■□□ 2
CHD1O14646 MIR6869-201ENST00000619434 62 ntBASIC27.52■■■□□ 2
CHD1O14646 LINC00895-201ENST00000629028 1637 ntBASIC27.52■■■□□ 2
CHD1O14646 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CHD1O14646 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC27.51■■□□□ 1.99
CHD1O14646 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
CHD1O14646 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
CHD1O14646 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CHD1O14646 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC27.51■■□□□ 1.99
CHD1O14646 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC27.51■■□□□ 1.99
CHD1O14646 RPSAP52-203ENST00000622976 1023 ntBASIC27.51■■□□□ 1.99
CHD1O14646 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC27.51■■□□□ 1.99
CHD1O14646 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC27.51■■□□□ 1.99
CHD1O14646 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CHD1O14646 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
CHD1O14646 ACTBP11-201ENST00000436287 1126 ntBASIC27.5■■□□□ 1.99
CHD1O14646 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC27.5■■□□□ 1.99
CHD1O14646 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC27.5■■□□□ 1.99
CHD1O14646 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CHD1O14646 ARL16-210ENST00000574938 751 ntTSL 2 BASIC27.5■■□□□ 1.99
CHD1O14646 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC27.5■■□□□ 1.99
CHD1O14646 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
CHD1O14646 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CHD1O14646 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC27.5■■□□□ 1.99
CHD1O14646 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC27.5■■□□□ 1.99
CHD1O14646 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC27.5■■□□□ 1.99
CHD1O14646 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CHD1O14646 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC27.5■■□□□ 1.99
CHD1O14646 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC27.5■■□□□ 1.99
CHD1O14646 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC27.5■■□□□ 1.99
CHD1O14646 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC27.5■■□□□ 1.99
CHD1O14646 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CHD1O14646 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CHD1O14646 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CHD1O14646 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CHD1O14646 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC27.49■■□□□ 1.99
CHD1O14646 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CHD1O14646 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CHD1O14646 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CHD1O14646 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
CHD1O14646 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC27.49■■□□□ 1.99
CHD1O14646 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC27.49■■□□□ 1.99
CHD1O14646 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC27.49■■□□□ 1.99
CHD1O14646 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC27.49■■□□□ 1.99
CHD1O14646 RAB35-202ENST00000534951 939 ntTSL 2 BASIC27.49■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms