Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RCCD1A6NED2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RCCD1A6NED2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RCCD1A6NED2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RCCD1A6NED2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.4■□□□□ 0.54
RCCD1A6NED2 AL645728.1-201ENST00000366221 2101 ntBASIC18.4■□□□□ 0.54
RCCD1A6NED2 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RCCD1A6NED2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RCCD1A6NED2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.39■□□□□ 0.54
RCCD1A6NED2 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RCCD1A6NED2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RCCD1A6NED2 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RCCD1A6NED2 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RCCD1A6NED2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RCCD1A6NED2 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RCCD1A6NED2 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
RCCD1A6NED2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
RCCD1A6NED2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RCCD1A6NED2 AC005521.1-201ENST00000393351 872 ntBASIC18.39■□□□□ 0.53
RCCD1A6NED2 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.39■□□□□ 0.53
RCCD1A6NED2 RNF152P1-201ENST00000397754 604 ntBASIC18.39■□□□□ 0.53
RCCD1A6NED2 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.39■□□□□ 0.53
RCCD1A6NED2 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.39■□□□□ 0.53
RCCD1A6NED2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.39■□□□□ 0.53
RCCD1A6NED2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.39■□□□□ 0.53
RCCD1A6NED2 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.39■□□□□ 0.53
RCCD1A6NED2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.39■□□□□ 0.53
RCCD1A6NED2 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.39■□□□□ 0.53
RCCD1A6NED2 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.39■□□□□ 0.53
RCCD1A6NED2 AC005363.2-201ENST00000618631 242 ntBASIC18.39■□□□□ 0.53
RCCD1A6NED2 AC133561.5-201ENST00000635547 218 ntBASIC18.39■□□□□ 0.53
RCCD1A6NED2 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.39■□□□□ 0.53
RCCD1A6NED2 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RCCD1A6NED2 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RCCD1A6NED2 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.39■□□□□ 0.53
RCCD1A6NED2 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.39■□□□□ 0.53
RCCD1A6NED2 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RCCD1A6NED2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
RCCD1A6NED2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RCCD1A6NED2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RCCD1A6NED2 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RCCD1A6NED2 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.39■□□□□ 0.53
RCCD1A6NED2 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.39■□□□□ 0.53
RCCD1A6NED2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.39■□□□□ 0.53
RCCD1A6NED2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.38■□□□□ 0.53
RCCD1A6NED2 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.38■□□□□ 0.53
RCCD1A6NED2 AC132872.4-202ENST00000622924 2756 ntBASIC18.38■□□□□ 0.53
RCCD1A6NED2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RCCD1A6NED2 HLA-A-202ENST00000376806 1854 ntBASIC18.38■□□□□ 0.53
RCCD1A6NED2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RCCD1A6NED2 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RCCD1A6NED2 KRT18P57-201ENST00000443599 1254 ntBASIC18.38■□□□□ 0.53
RCCD1A6NED2 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RCCD1A6NED2 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RCCD1A6NED2 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.38■□□□□ 0.53
RCCD1A6NED2 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RCCD1A6NED2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RCCD1A6NED2 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.38■□□□□ 0.53
RCCD1A6NED2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.38■□□□□ 0.53
RCCD1A6NED2 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RCCD1A6NED2 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RCCD1A6NED2 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RCCD1A6NED2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.38■□□□□ 0.53
RCCD1A6NED2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RCCD1A6NED2 CYP2T1P-202ENST00000641596 2535 ntBASIC18.38■□□□□ 0.53
RCCD1A6NED2 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
RCCD1A6NED2 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RCCD1A6NED2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RCCD1A6NED2 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RCCD1A6NED2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RCCD1A6NED2 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.37■□□□□ 0.53
RCCD1A6NED2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RCCD1A6NED2 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RCCD1A6NED2 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RCCD1A6NED2 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RCCD1A6NED2 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.37■□□□□ 0.53
RCCD1A6NED2 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.37■□□□□ 0.53
RCCD1A6NED2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RCCD1A6NED2 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RCCD1A6NED2 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RCCD1A6NED2 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.37■□□□□ 0.53
RCCD1A6NED2 HOMER2P1-201ENST00000455653 964 ntBASIC18.37■□□□□ 0.53
RCCD1A6NED2 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.37■□□□□ 0.53
RCCD1A6NED2 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.37■□□□□ 0.53
RCCD1A6NED2 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.37■□□□□ 0.53
RCCD1A6NED2 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.37■□□□□ 0.53
RCCD1A6NED2 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.37■□□□□ 0.53
RCCD1A6NED2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RCCD1A6NED2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RCCD1A6NED2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.37■□□□□ 0.53
RCCD1A6NED2 AL353593.2-201ENST00000602529 1483 ntBASIC18.37■□□□□ 0.53
RCCD1A6NED2 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.37■□□□□ 0.53
RCCD1A6NED2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RCCD1A6NED2 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RCCD1A6NED2 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RCCD1A6NED2 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RCCD1A6NED2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RCCD1A6NED2 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RCCD1A6NED2 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
RCCD1A6NED2 BCL2-203ENST00000589955 5011 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms