Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMIM28A0A1B0GU29 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMIM28A0A1B0GU29 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SMIM28A0A1B0GU29 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SMIM28A0A1B0GU29 AC093525.9-201ENST00000624961 1746 ntBASIC18.47■□□□□ 0.55
SMIM28A0A1B0GU29 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.47■□□□□ 0.55
SMIM28A0A1B0GU29 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.47■□□□□ 0.55
SMIM28A0A1B0GU29 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.47■□□□□ 0.55
SMIM28A0A1B0GU29 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.47■□□□□ 0.55
SMIM28A0A1B0GU29 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.47■□□□□ 0.55
SMIM28A0A1B0GU29 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.47■□□□□ 0.55
SMIM28A0A1B0GU29 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.47■□□□□ 0.55
SMIM28A0A1B0GU29 KRT19P2-202ENST00000557173 1012 ntBASIC18.47■□□□□ 0.55
SMIM28A0A1B0GU29 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.47■□□□□ 0.55
SMIM28A0A1B0GU29 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.47■□□□□ 0.55
SMIM28A0A1B0GU29 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMIM28A0A1B0GU29 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMIM28A0A1B0GU29 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMIM28A0A1B0GU29 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMIM28A0A1B0GU29 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SMIM28A0A1B0GU29 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SMIM28A0A1B0GU29 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMIM28A0A1B0GU29 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMIM28A0A1B0GU29 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.47■□□□□ 0.55
SMIM28A0A1B0GU29 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SMIM28A0A1B0GU29 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM28A0A1B0GU29 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.46■□□□□ 0.55
SMIM28A0A1B0GU29 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM28A0A1B0GU29 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM28A0A1B0GU29 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM28A0A1B0GU29 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
SMIM28A0A1B0GU29 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM28A0A1B0GU29 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.46■□□□□ 0.55
SMIM28A0A1B0GU29 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
SMIM28A0A1B0GU29 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM28A0A1B0GU29 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM28A0A1B0GU29 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM28A0A1B0GU29 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.46■□□□□ 0.55
SMIM28A0A1B0GU29 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.46■□□□□ 0.55
SMIM28A0A1B0GU29 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.46■□□□□ 0.55
SMIM28A0A1B0GU29 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.46■□□□□ 0.55
SMIM28A0A1B0GU29 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.46■□□□□ 0.55
SMIM28A0A1B0GU29 ACTL9-202ENST00000612068 1252 ntBASIC18.46■□□□□ 0.55
SMIM28A0A1B0GU29 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM28A0A1B0GU29 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM28A0A1B0GU29 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SMIM28A0A1B0GU29 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM28A0A1B0GU29 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM28A0A1B0GU29 AC129492.6-201ENST00000611383 1305 ntBASIC18.46■□□□□ 0.55
SMIM28A0A1B0GU29 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 AC116353.5-201ENST00000638148 1699 ntBASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 PDPK2P-202ENST00000562415 1191 ntBASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 AC023141.13-201ENST00000604991 943 ntBASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 AC025580.3-201ENST00000617932 1424 ntBASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 EGFEM1P-202ENST00000431685 1563 ntBASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SMIM28A0A1B0GU29 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMIM28A0A1B0GU29 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMIM28A0A1B0GU29 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMIM28A0A1B0GU29 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMIM28A0A1B0GU29 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.44■□□□□ 0.54
SMIM28A0A1B0GU29 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SMIM28A0A1B0GU29 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SMIM28A0A1B0GU29 RNF165-205ENST00000588679 2904 ntBASIC18.44■□□□□ 0.54
SMIM28A0A1B0GU29 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SMIM28A0A1B0GU29 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.44■□□□□ 0.54
SMIM28A0A1B0GU29 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SMIM28A0A1B0GU29 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.44■□□□□ 0.54
SMIM28A0A1B0GU29 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.44■□□□□ 0.54
SMIM28A0A1B0GU29 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SMIM28A0A1B0GU29 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms