Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 MYCLP1-201ENST00000372451 1075 ntBASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 RPS2P1-201ENST00000434010 821 ntBASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 AC145285.3-201ENST00000564603 959 ntBASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 AC109462.3-201ENST00000573934 613 ntBASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 MIR3687-2-201ENST00000577708 61 ntBASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 AC019129.2-201ENST00000609837 1235 ntBASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 MIR3687-1-201ENST00000614492 61 ntBASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 AL691403.2-201ENST00000618460 490 ntBASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 AC133963.1-201ENST00000504166 1679 ntBASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB11Q9Y5F2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB11Q9Y5F2 AL049757.1-201ENST00000616842 1596 ntBASIC16.98■□□□□ 0.31
PCDHB11Q9Y5F2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PCDHB11Q9Y5F2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB11Q9Y5F2 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB11Q9Y5F2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB11Q9Y5F2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB11Q9Y5F2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PCDHB11Q9Y5F2 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PCDHB11Q9Y5F2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHB11Q9Y5F2 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB11Q9Y5F2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB11Q9Y5F2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB11Q9Y5F2 AC092910.1-201ENST00000482027 1129 ntBASIC16.98■□□□□ 0.31
PCDHB11Q9Y5F2 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB11Q9Y5F2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB11Q9Y5F2 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.98■□□□□ 0.31
PCDHB11Q9Y5F2 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHB11Q9Y5F2 AD001527.2-201ENST00000622994 785 ntBASIC16.98■□□□□ 0.31
PCDHB11Q9Y5F2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PCDHB11Q9Y5F2 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHB11Q9Y5F2 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB11Q9Y5F2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.98■□□□□ 0.31
PCDHB11Q9Y5F2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB11Q9Y5F2 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB11Q9Y5F2 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
PCDHB11Q9Y5F2 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHB11Q9Y5F2 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHB11Q9Y5F2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PCDHB11Q9Y5F2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB11Q9Y5F2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.97■□□□□ 0.31
PCDHB11Q9Y5F2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB11Q9Y5F2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB11Q9Y5F2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB11Q9Y5F2 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB11Q9Y5F2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.97■□□□□ 0.31
PCDHB11Q9Y5F2 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
PCDHB11Q9Y5F2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.97■□□□□ 0.31
PCDHB11Q9Y5F2 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.97■□□□□ 0.31
PCDHB11Q9Y5F2 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB11Q9Y5F2 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.97■□□□□ 0.31
PCDHB11Q9Y5F2 AC079781.4-201ENST00000641908 219 ntBASIC16.97■□□□□ 0.31
PCDHB11Q9Y5F2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHB11Q9Y5F2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHB11Q9Y5F2 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHB11Q9Y5F2 AL353593.2-201ENST00000602529 1483 ntBASIC16.97■□□□□ 0.31
PCDHB11Q9Y5F2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PCDHB11Q9Y5F2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB11Q9Y5F2 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB11Q9Y5F2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHB11Q9Y5F2 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PCDHB11Q9Y5F2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
PCDHB11Q9Y5F2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB11Q9Y5F2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PCDHB11Q9Y5F2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
PCDHB11Q9Y5F2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PCDHB11Q9Y5F2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB11Q9Y5F2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PCDHB11Q9Y5F2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDHB11Q9Y5F2 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms