Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF6Q9Y252 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF6Q9Y252 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF6Q9Y252 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF6Q9Y252 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.36■□□□□ 0.21
RNF6Q9Y252 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.36■□□□□ 0.21
RNF6Q9Y252 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.36■□□□□ 0.21
RNF6Q9Y252 DUTP2-201ENST00000519164 463 ntBASIC16.36■□□□□ 0.21
RNF6Q9Y252 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF6Q9Y252 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.36■□□□□ 0.21
RNF6Q9Y252 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
RNF6Q9Y252 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RNF6Q9Y252 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.36■□□□□ 0.21
RNF6Q9Y252 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF6Q9Y252 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.36■□□□□ 0.21
RNF6Q9Y252 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.36■□□□□ 0.21
RNF6Q9Y252 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF6Q9Y252 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF6Q9Y252 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF6Q9Y252 AC233702.3-201ENST00000578656 1387 ntBASIC16.36■□□□□ 0.21
RNF6Q9Y252 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF6Q9Y252 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.36■□□□□ 0.21
RNF6Q9Y252 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
RNF6Q9Y252 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF6Q9Y252 AGGF1P2-201ENST00000426656 2106 ntBASIC16.36■□□□□ 0.21
RNF6Q9Y252 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.36■□□□□ 0.21
RNF6Q9Y252 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF6Q9Y252 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RNF6Q9Y252 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF6Q9Y252 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RNF6Q9Y252 AL024508.2-201ENST00000607749 1894 ntBASIC16.35■□□□□ 0.21
RNF6Q9Y252 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.35■□□□□ 0.21
RNF6Q9Y252 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RNF6Q9Y252 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF6Q9Y252 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF6Q9Y252 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF6Q9Y252 CICP6-201ENST00000457191 2729 ntBASIC16.35■□□□□ 0.21
RNF6Q9Y252 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF6Q9Y252 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RNF6Q9Y252 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF6Q9Y252 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF6Q9Y252 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF6Q9Y252 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF6Q9Y252 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
RNF6Q9Y252 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF6Q9Y252 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF6Q9Y252 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF6Q9Y252 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
RNF6Q9Y252 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF6Q9Y252 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF6Q9Y252 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF6Q9Y252 Z69720.1-201ENST00000601483 472 ntBASIC16.35■□□□□ 0.21
RNF6Q9Y252 AC099336.1-202ENST00000602961 463 ntBASIC16.35■□□□□ 0.21
RNF6Q9Y252 AC024563.2-201ENST00000603282 481 ntBASIC16.35■□□□□ 0.21
RNF6Q9Y252 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.35■□□□□ 0.21
RNF6Q9Y252 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.35■□□□□ 0.21
RNF6Q9Y252 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF6Q9Y252 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF6Q9Y252 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF6Q9Y252 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RNF6Q9Y252 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RNF6Q9Y252 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF6Q9Y252 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF6Q9Y252 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF6Q9Y252 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF6Q9Y252 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF6Q9Y252 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
RNF6Q9Y252 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF6Q9Y252 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RNF6Q9Y252 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RNF6Q9Y252 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF6Q9Y252 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF6Q9Y252 HLA-J-201ENST00000462773 1622 ntBASIC16.34■□□□□ 0.21
RNF6Q9Y252 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF6Q9Y252 PCDH8P1-201ENST00000428983 2773 ntBASIC16.34■□□□□ 0.21
RNF6Q9Y252 AC105020.1-201ENST00000435356 2205 ntBASIC16.34■□□□□ 0.21
RNF6Q9Y252 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF6Q9Y252 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF6Q9Y252 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RNF6Q9Y252 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF6Q9Y252 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF6Q9Y252 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF6Q9Y252 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF6Q9Y252 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RNF6Q9Y252 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF6Q9Y252 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF6Q9Y252 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RNF6Q9Y252 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF6Q9Y252 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF6Q9Y252 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF6Q9Y252 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF6Q9Y252 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.34■□□□□ 0.21
RNF6Q9Y252 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF6Q9Y252 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF6Q9Y252 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RNF6Q9Y252 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.34■□□□□ 0.21
RNF6Q9Y252 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF6Q9Y252 IGHGP-201ENST00000390555 1178 ntBASIC16.34■□□□□ 0.21
RNF6Q9Y252 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RNF6Q9Y252 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms