Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC27.05■■□□□ 1.92
RIMBP3Q9UFD9 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC27.05■■□□□ 1.92
RIMBP3Q9UFD9 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
RIMBP3Q9UFD9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
RIMBP3Q9UFD9 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RIMBP3Q9UFD9 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
RIMBP3Q9UFD9 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
RIMBP3Q9UFD9 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC27.04■■□□□ 1.92
RIMBP3Q9UFD9 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC27.04■■□□□ 1.92
RIMBP3Q9UFD9 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC27.04■■□□□ 1.92
RIMBP3Q9UFD9 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC27.04■■□□□ 1.92
RIMBP3Q9UFD9 BTNL10-201ENST00000595971 695 ntBASIC27.04■■□□□ 1.92
RIMBP3Q9UFD9 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
RIMBP3Q9UFD9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
RIMBP3Q9UFD9 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
RIMBP3Q9UFD9 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC27.03■■□□□ 1.92
RIMBP3Q9UFD9 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
RIMBP3Q9UFD9 AL161938.1-201ENST00000569833 2180 ntBASIC27.03■■□□□ 1.92
RIMBP3Q9UFD9 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC27.03■■□□□ 1.92
RIMBP3Q9UFD9 FAM220BP-201ENST00000377689 816 ntBASIC27.03■■□□□ 1.92
RIMBP3Q9UFD9 LBH-202ENST00000401506 485 ntTSL 3 BASIC27.03■■□□□ 1.92
RIMBP3Q9UFD9 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC27.03■■□□□ 1.92
RIMBP3Q9UFD9 AC009542.2-202ENST00000619004 1067 ntBASIC27.03■■□□□ 1.92
RIMBP3Q9UFD9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
RIMBP3Q9UFD9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
RIMBP3Q9UFD9 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC27.03■■□□□ 1.92
RIMBP3Q9UFD9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
RIMBP3Q9UFD9 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC27.03■■□□□ 1.92
RIMBP3Q9UFD9 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
RIMBP3Q9UFD9 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
RIMBP3Q9UFD9 AC009949.1-201ENST00000623048 1830 ntBASIC27.02■■□□□ 1.92
RIMBP3Q9UFD9 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC27.02■■□□□ 1.92
RIMBP3Q9UFD9 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
RIMBP3Q9UFD9 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC27.02■■□□□ 1.92
RIMBP3Q9UFD9 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC27.02■■□□□ 1.92
RIMBP3Q9UFD9 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC27.02■■□□□ 1.92
RIMBP3Q9UFD9 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC27.02■■□□□ 1.92
RIMBP3Q9UFD9 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
RIMBP3Q9UFD9 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC27.02■■□□□ 1.92
RIMBP3Q9UFD9 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC27.02■■□□□ 1.92
RIMBP3Q9UFD9 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
RIMBP3Q9UFD9 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC27.02■■□□□ 1.92
RIMBP3Q9UFD9 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC27.02■■□□□ 1.92
RIMBP3Q9UFD9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
RIMBP3Q9UFD9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
RIMBP3Q9UFD9 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC27.01■■□□□ 1.92
RIMBP3Q9UFD9 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC27.01■■□□□ 1.92
RIMBP3Q9UFD9 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC27.01■■□□□ 1.92
RIMBP3Q9UFD9 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.92
RIMBP3Q9UFD9 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC27.01■■□□□ 1.92
RIMBP3Q9UFD9 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
RIMBP3Q9UFD9 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
RIMBP3Q9UFD9 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
RIMBP3Q9UFD9 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
RIMBP3Q9UFD9 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
RIMBP3Q9UFD9 AL049812.1-201ENST00000432563 2267 ntBASIC27.01■■□□□ 1.91
RIMBP3Q9UFD9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
RIMBP3Q9UFD9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC27.01■■□□□ 1.91
RIMBP3Q9UFD9 SP100-208ENST00000427101 1922 ntTSL 2 BASIC27.01■■□□□ 1.91
RIMBP3Q9UFD9 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
RIMBP3Q9UFD9 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
RIMBP3Q9UFD9 HNRNPRP1-201ENST00000453465 1695 ntBASIC27.01■■□□□ 1.91
RIMBP3Q9UFD9 LOX-206ENST00000639739 1626 ntTSL 5 BASIC27.01■■□□□ 1.91
RIMBP3Q9UFD9 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC27.01■■□□□ 1.91
RIMBP3Q9UFD9 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC27.01■■□□□ 1.91
RIMBP3Q9UFD9 MIR5572-201ENST00000583188 137 ntBASIC27.01■■□□□ 1.91
RIMBP3Q9UFD9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC27■■□□□ 1.91
RIMBP3Q9UFD9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RIMBP3Q9UFD9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC27■■□□□ 1.91
RIMBP3Q9UFD9 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC27■■□□□ 1.91
RIMBP3Q9UFD9 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC27■■□□□ 1.91
RIMBP3Q9UFD9 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC27■■□□□ 1.91
RIMBP3Q9UFD9 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RIMBP3Q9UFD9 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC27■■□□□ 1.91
RIMBP3Q9UFD9 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC27■■□□□ 1.91
RIMBP3Q9UFD9 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
RIMBP3Q9UFD9 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC27■■□□□ 1.91
RIMBP3Q9UFD9 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
RIMBP3Q9UFD9 NUS1P3-201ENST00000423502 862 ntBASIC27■■□□□ 1.91
RIMBP3Q9UFD9 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RIMBP3Q9UFD9 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC27■■□□□ 1.91
RIMBP3Q9UFD9 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC27■■□□□ 1.91
RIMBP3Q9UFD9 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
RIMBP3Q9UFD9 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC27■■□□□ 1.91
RIMBP3Q9UFD9 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC27■■□□□ 1.91
RIMBP3Q9UFD9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RIMBP3Q9UFD9 PHGDH-209ENST00000641074 1780 ntBASIC27■■□□□ 1.91
RIMBP3Q9UFD9 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RIMBP3Q9UFD9 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC26.99■■□□□ 1.91
RIMBP3Q9UFD9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
RIMBP3Q9UFD9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
RIMBP3Q9UFD9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
RIMBP3Q9UFD9 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
RIMBP3Q9UFD9 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
RIMBP3Q9UFD9 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RIMBP3Q9UFD9 ACTG1P17-201ENST00000558391 1119 ntBASIC26.99■■□□□ 1.91
RIMBP3Q9UFD9 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC26.99■■□□□ 1.91
RIMBP3Q9UFD9 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC26.99■■□□□ 1.91
RIMBP3Q9UFD9 HCG18-245ENST00000602550 559 ntTSL 4 BASIC26.99■■□□□ 1.91
RIMBP3Q9UFD9 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC26.99■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms