Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
CUEDC1Q9NWM3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CUEDC1Q9NWM3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CUEDC1Q9NWM3 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.77■□□□□ 0.28
CUEDC1Q9NWM3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CUEDC1Q9NWM3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CUEDC1Q9NWM3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.77■□□□□ 0.28
CUEDC1Q9NWM3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CUEDC1Q9NWM3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CUEDC1Q9NWM3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CUEDC1Q9NWM3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.77■□□□□ 0.28
CUEDC1Q9NWM3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CUEDC1Q9NWM3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CUEDC1Q9NWM3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CUEDC1Q9NWM3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.77■□□□□ 0.28
CUEDC1Q9NWM3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.77■□□□□ 0.28
CUEDC1Q9NWM3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.77■□□□□ 0.28
CUEDC1Q9NWM3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CUEDC1Q9NWM3 SART3-203ENST00000546611 1184 ntBASIC16.77■□□□□ 0.28
CUEDC1Q9NWM3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.77■□□□□ 0.28
CUEDC1Q9NWM3 NKAPP1-205ENST00000585790 367 ntBASIC16.77■□□□□ 0.28
CUEDC1Q9NWM3 AC073592.4-201ENST00000623827 446 ntBASIC16.77■□□□□ 0.28
CUEDC1Q9NWM3 AF228730.7-201ENST00000641842 219 ntBASIC16.77■□□□□ 0.28
CUEDC1Q9NWM3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CUEDC1Q9NWM3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.77■□□□□ 0.28
CUEDC1Q9NWM3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CUEDC1Q9NWM3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CUEDC1Q9NWM3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CUEDC1Q9NWM3 AL645608.8-201ENST00000606034 2086 ntBASIC16.77■□□□□ 0.27
CUEDC1Q9NWM3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CUEDC1Q9NWM3 SIGLEC16-201ENST00000599858 1437 ntBASIC16.77■□□□□ 0.27
CUEDC1Q9NWM3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CUEDC1Q9NWM3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
CUEDC1Q9NWM3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CUEDC1Q9NWM3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CUEDC1Q9NWM3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
CUEDC1Q9NWM3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CUEDC1Q9NWM3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CUEDC1Q9NWM3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CUEDC1Q9NWM3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CUEDC1Q9NWM3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CUEDC1Q9NWM3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.76■□□□□ 0.27
CUEDC1Q9NWM3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CUEDC1Q9NWM3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CUEDC1Q9NWM3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.76■□□□□ 0.27
CUEDC1Q9NWM3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.76■□□□□ 0.27
CUEDC1Q9NWM3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.76■□□□□ 0.27
CUEDC1Q9NWM3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CUEDC1Q9NWM3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CUEDC1Q9NWM3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CUEDC1Q9NWM3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.76■□□□□ 0.27
CUEDC1Q9NWM3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.76■□□□□ 0.27
CUEDC1Q9NWM3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CUEDC1Q9NWM3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CUEDC1Q9NWM3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.76■□□□□ 0.27
CUEDC1Q9NWM3 KRT18P58-201ENST00000527480 1120 ntBASIC16.76■□□□□ 0.27
CUEDC1Q9NWM3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
CUEDC1Q9NWM3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.76■□□□□ 0.27
CUEDC1Q9NWM3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.76■□□□□ 0.27
CUEDC1Q9NWM3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.76■□□□□ 0.27
CUEDC1Q9NWM3 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.76■□□□□ 0.27
CUEDC1Q9NWM3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.76■□□□□ 0.27
CUEDC1Q9NWM3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.76■□□□□ 0.27
CUEDC1Q9NWM3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.76■□□□□ 0.27
CUEDC1Q9NWM3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.76■□□□□ 0.27
CUEDC1Q9NWM3 AL356309.3-201ENST00000624132 1934 ntBASIC16.76■□□□□ 0.27
CUEDC1Q9NWM3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CUEDC1Q9NWM3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CUEDC1Q9NWM3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 TP73-AS1-207ENST00000624167 988 ntBASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CUEDC1Q9NWM3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms