Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.37■□□□□ 0.69
CBX8Q9HC52 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CBX8Q9HC52 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CBX8Q9HC52 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CBX8Q9HC52 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.37■□□□□ 0.69
CBX8Q9HC52 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.37■□□□□ 0.69
CBX8Q9HC52 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.37■□□□□ 0.69
CBX8Q9HC52 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.37■□□□□ 0.69
CBX8Q9HC52 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.37■□□□□ 0.69
CBX8Q9HC52 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CBX8Q9HC52 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.37■□□□□ 0.69
CBX8Q9HC52 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CBX8Q9HC52 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CBX8Q9HC52 AP006294.2-201ENST00000641667 209 ntBASIC19.37■□□□□ 0.69
CBX8Q9HC52 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CBX8Q9HC52 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CBX8Q9HC52 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CBX8Q9HC52 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CBX8Q9HC52 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CBX8Q9HC52 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CBX8Q9HC52 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.36■□□□□ 0.69
CBX8Q9HC52 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.36■□□□□ 0.69
CBX8Q9HC52 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.36■□□□□ 0.69
CBX8Q9HC52 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CBX8Q9HC52 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX8Q9HC52 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX8Q9HC52 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX8Q9HC52 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.36■□□□□ 0.69
CBX8Q9HC52 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CBX8Q9HC52 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX8Q9HC52 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX8Q9HC52 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX8Q9HC52 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CBX8Q9HC52 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX8Q9HC52 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
CBX8Q9HC52 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX8Q9HC52 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.36■□□□□ 0.69
CBX8Q9HC52 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CBX8Q9HC52 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.36■□□□□ 0.69
CBX8Q9HC52 HLA-F-220ENST00000434407 884 ntBASIC19.36■□□□□ 0.69
CBX8Q9HC52 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.36■□□□□ 0.69
CBX8Q9HC52 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CBX8Q9HC52 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.36■□□□□ 0.69
CBX8Q9HC52 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX8Q9HC52 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX8Q9HC52 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
CBX8Q9HC52 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.36■□□□□ 0.69
CBX8Q9HC52 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX8Q9HC52 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CBX8Q9HC52 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CBX8Q9HC52 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CBX8Q9HC52 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CBX8Q9HC52 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.36■□□□□ 0.69
CBX8Q9HC52 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CBX8Q9HC52 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CBX8Q9HC52 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CBX8Q9HC52 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX8Q9HC52 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CBX8Q9HC52 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CBX8Q9HC52 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CBX8Q9HC52 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC19.35■□□□□ 0.69
CBX8Q9HC52 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CBX8Q9HC52 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CBX8Q9HC52 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CBX8Q9HC52 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CBX8Q9HC52 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CBX8Q9HC52 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CBX8Q9HC52 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CBX8Q9HC52 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CBX8Q9HC52 MIR718-201ENST00000390190 70 ntBASIC19.35■□□□□ 0.69
CBX8Q9HC52 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.35■□□□□ 0.69
CBX8Q9HC52 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CBX8Q9HC52 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.35■□□□□ 0.69
CBX8Q9HC52 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CBX8Q9HC52 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CBX8Q9HC52 AC141257.4-201ENST00000634557 245 ntBASIC19.35■□□□□ 0.69
CBX8Q9HC52 AC136944.6-201ENST00000634818 245 ntBASIC19.35■□□□□ 0.69
CBX8Q9HC52 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.35■□□□□ 0.69
CBX8Q9HC52 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.35■□□□□ 0.69
CBX8Q9HC52 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
CBX8Q9HC52 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CBX8Q9HC52 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
CBX8Q9HC52 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CBX8Q9HC52 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.35■□□□□ 0.69
CBX8Q9HC52 EGFEM1P-202ENST00000431685 1563 ntBASIC19.35■□□□□ 0.69
CBX8Q9HC52 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CBX8Q9HC52 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CBX8Q9HC52 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.35■□□□□ 0.69
CBX8Q9HC52 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CBX8Q9HC52 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CBX8Q9HC52 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CBX8Q9HC52 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CBX8Q9HC52 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CBX8Q9HC52 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX8Q9HC52 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.34■□□□□ 0.69
CBX8Q9HC52 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.34■□□□□ 0.69
CBX8Q9HC52 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.34■□□□□ 0.69
CBX8Q9HC52 AL596257.1-201ENST00000641463 2694 ntBASIC19.34■□□□□ 0.69
CBX8Q9HC52 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX8Q9HC52 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms