Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNTNAP3Q9BZ76 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNTNAP3Q9BZ76 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNTNAP3Q9BZ76 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNTNAP3Q9BZ76 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNTNAP3Q9BZ76 PTCHD3P3-201ENST00000403073 906 ntBASIC16.46■□□□□ 0.23
CNTNAP3Q9BZ76 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CNTNAP3Q9BZ76 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.46■□□□□ 0.23
CNTNAP3Q9BZ76 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.46■□□□□ 0.23
CNTNAP3Q9BZ76 RN7SL752P-201ENST00000463779 287 ntBASIC16.46■□□□□ 0.23
CNTNAP3Q9BZ76 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.46■□□□□ 0.23
CNTNAP3Q9BZ76 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CNTNAP3Q9BZ76 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNTNAP3Q9BZ76 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.46■□□□□ 0.23
CNTNAP3Q9BZ76 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.46■□□□□ 0.23
CNTNAP3Q9BZ76 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CNTNAP3Q9BZ76 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CNTNAP3Q9BZ76 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.46■□□□□ 0.23
CNTNAP3Q9BZ76 AC099522.2-201ENST00000607001 744 ntBASIC16.46■□□□□ 0.23
CNTNAP3Q9BZ76 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.46■□□□□ 0.23
CNTNAP3Q9BZ76 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.46■□□□□ 0.23
CNTNAP3Q9BZ76 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNTNAP3Q9BZ76 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNTNAP3Q9BZ76 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.46■□□□□ 0.23
CNTNAP3Q9BZ76 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNTNAP3Q9BZ76 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.46■□□□□ 0.23
CNTNAP3Q9BZ76 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CNTNAP3Q9BZ76 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.46■□□□□ 0.22
CNTNAP3Q9BZ76 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 SPDYE14P-201ENST00000442619 822 ntBASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 RN7SL589P-201ENST00000481268 310 ntBASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 KRT8P23-201ENST00000560090 1207 ntBASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 AC140912.1-201ENST00000577171 1054 ntBASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.45■□□□□ 0.22
CNTNAP3Q9BZ76 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTNAP3Q9BZ76 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CNTNAP3Q9BZ76 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.44■□□□□ 0.22
CNTNAP3Q9BZ76 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
CNTNAP3Q9BZ76 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CNTNAP3Q9BZ76 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTNAP3Q9BZ76 AC022144.1-201ENST00000602255 1580 ntBASIC16.44■□□□□ 0.22
CNTNAP3Q9BZ76 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTNAP3Q9BZ76 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.44■□□□□ 0.22
CNTNAP3Q9BZ76 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTNAP3Q9BZ76 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CNTNAP3Q9BZ76 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.44■□□□□ 0.22
CNTNAP3Q9BZ76 KRT18P65-201ENST00000439811 1286 ntBASIC16.44■□□□□ 0.22
CNTNAP3Q9BZ76 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.44■□□□□ 0.22
CNTNAP3Q9BZ76 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTNAP3Q9BZ76 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.44■□□□□ 0.22
CNTNAP3Q9BZ76 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.44■□□□□ 0.22
CNTNAP3Q9BZ76 AC243562.1-201ENST00000560672 389 ntBASIC16.44■□□□□ 0.22
CNTNAP3Q9BZ76 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.44■□□□□ 0.22
CNTNAP3Q9BZ76 RN7SL219P-201ENST00000582872 296 ntBASIC16.44■□□□□ 0.22
CNTNAP3Q9BZ76 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTNAP3Q9BZ76 MIR6080-201ENST00000617359 66 ntBASIC16.44■□□□□ 0.22
CNTNAP3Q9BZ76 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.44■□□□□ 0.22
CNTNAP3Q9BZ76 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.44■□□□□ 0.22
CNTNAP3Q9BZ76 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.44■□□□□ 0.22
CNTNAP3Q9BZ76 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTNAP3Q9BZ76 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTNAP3Q9BZ76 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.44■□□□□ 0.22
CNTNAP3Q9BZ76 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 AC007541.1-201ENST00000570282 1469 ntBASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 AL353593.2-201ENST00000602529 1483 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms