Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.99■□□□□ 0.95
RPAP1Q9BWH6 AC109462.3-201ENST00000573934 613 ntBASIC20.99■□□□□ 0.95
RPAP1Q9BWH6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPAP1Q9BWH6 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPAP1Q9BWH6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.99■□□□□ 0.95
RPAP1Q9BWH6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.99■□□□□ 0.95
RPAP1Q9BWH6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RPAP1Q9BWH6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.99■□□□□ 0.95
RPAP1Q9BWH6 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RPAP1Q9BWH6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPAP1Q9BWH6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RPAP1Q9BWH6 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RPAP1Q9BWH6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RPAP1Q9BWH6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPAP1Q9BWH6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.98■□□□□ 0.95
RPAP1Q9BWH6 AC003669.1-201ENST00000334569 611 ntBASIC20.98■□□□□ 0.95
RPAP1Q9BWH6 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.98■□□□□ 0.95
RPAP1Q9BWH6 STK25P1-201ENST00000585406 838 ntBASIC20.98■□□□□ 0.95
RPAP1Q9BWH6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPAP1Q9BWH6 AP001094.4-201ENST00000579008 2176 ntBASIC20.98■□□□□ 0.95
RPAP1Q9BWH6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RPAP1Q9BWH6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.98■□□□□ 0.95
RPAP1Q9BWH6 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.98■□□□□ 0.95
RPAP1Q9BWH6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RPAP1Q9BWH6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPAP1Q9BWH6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RPAP1Q9BWH6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RPAP1Q9BWH6 AL023806.1-201ENST00000603994 1649 ntBASIC20.98■□□□□ 0.95
RPAP1Q9BWH6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPAP1Q9BWH6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 AL020989.1-201ENST00000422979 469 ntBASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 MIR3687-2-201ENST00000577708 61 ntBASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 MIR3687-1-201ENST00000614492 61 ntBASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 AC004706.3-202ENST00000621574 984 ntBASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 AC132938.5-201ENST00000624980 1813 ntBASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 AP006288.1-201ENST00000446065 395 ntBASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.97■□□□□ 0.95
RPAP1Q9BWH6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPAP1Q9BWH6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPAP1Q9BWH6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPAP1Q9BWH6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPAP1Q9BWH6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPAP1Q9BWH6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RPAP1Q9BWH6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPAP1Q9BWH6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPAP1Q9BWH6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPAP1Q9BWH6 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPAP1Q9BWH6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPAP1Q9BWH6 LYSMD4-203ENST00000378904 2122 ntBASIC20.96■□□□□ 0.95
RPAP1Q9BWH6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPAP1Q9BWH6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
RPAP1Q9BWH6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RPAP1Q9BWH6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.96■□□□□ 0.95
RPAP1Q9BWH6 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.96■□□□□ 0.95
RPAP1Q9BWH6 PMS2P2-201ENST00000425039 1128 ntBASIC20.96■□□□□ 0.95
RPAP1Q9BWH6 AC112482.1-201ENST00000492080 688 ntBASIC20.96■□□□□ 0.95
RPAP1Q9BWH6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPAP1Q9BWH6 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPAP1Q9BWH6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
RPAP1Q9BWH6 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms