Protein–RNA interactions for Protein: Q92925

SMARCD2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2Q92925 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCD2Q92925 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCD2Q92925 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SMARCD2Q92925 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCD2Q92925 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCD2Q92925 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCD2Q92925 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCD2Q92925 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCD2Q92925 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCD2Q92925 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.68■□□□□ 0.42
SMARCD2Q92925 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCD2Q92925 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.68■□□□□ 0.42
SMARCD2Q92925 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.68■□□□□ 0.42
SMARCD2Q92925 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.68■□□□□ 0.42
SMARCD2Q92925 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.68■□□□□ 0.42
SMARCD2Q92925 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.68■□□□□ 0.42
SMARCD2Q92925 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCD2Q92925 RN7SL589P-201ENST00000481268 310 ntBASIC17.68■□□□□ 0.42
SMARCD2Q92925 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCD2Q92925 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.68■□□□□ 0.42
SMARCD2Q92925 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.68■□□□□ 0.42
SMARCD2Q92925 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.68■□□□□ 0.42
SMARCD2Q92925 LINC00304-203ENST00000565008 1864 ntBASIC17.68■□□□□ 0.42
SMARCD2Q92925 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.68■□□□□ 0.42
SMARCD2Q92925 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SMARCD2Q92925 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCD2Q92925 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SMARCD2Q92925 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCD2Q92925 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCD2Q92925 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.68■□□□□ 0.42
SMARCD2Q92925 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.68■□□□□ 0.42
SMARCD2Q92925 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SMARCD2Q92925 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCD2Q92925 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCD2Q92925 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.68■□□□□ 0.42
SMARCD2Q92925 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.68■□□□□ 0.42
SMARCD2Q92925 AC020763.4-201ENST00000623414 4170 ntBASIC17.68■□□□□ 0.42
SMARCD2Q92925 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCD2Q92925 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD2Q92925 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.67■□□□□ 0.42
SMARCD2Q92925 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD2Q92925 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SMARCD2Q92925 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD2Q92925 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SMARCD2Q92925 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD2Q92925 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD2Q92925 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.67■□□□□ 0.42
SMARCD2Q92925 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD2Q92925 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.67■□□□□ 0.42
SMARCD2Q92925 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.67■□□□□ 0.42
SMARCD2Q92925 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.67■□□□□ 0.42
SMARCD2Q92925 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD2Q92925 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD2Q92925 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.67■□□□□ 0.42
SMARCD2Q92925 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.67■□□□□ 0.42
SMARCD2Q92925 AC015911.4-201ENST00000588022 1070 ntBASIC17.67■□□□□ 0.42
SMARCD2Q92925 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SMARCD2Q92925 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.67■□□□□ 0.42
SMARCD2Q92925 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD2Q92925 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.67■□□□□ 0.42
SMARCD2Q92925 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SMARCD2Q92925 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.67■□□□□ 0.42
SMARCD2Q92925 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD2Q92925 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
SMARCD2Q92925 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.67■□□□□ 0.42
SMARCD2Q92925 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SMARCD2Q92925 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
SMARCD2Q92925 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD2Q92925 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD2Q92925 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SMARCD2Q92925 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.67■□□□□ 0.42
SMARCD2Q92925 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCD2Q92925 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.67■□□□□ 0.42
SMARCD2Q92925 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SMARCD2Q92925 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.66■□□□□ 0.42
SMARCD2Q92925 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.66■□□□□ 0.42
SMARCD2Q92925 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCD2Q92925 LYSMD4-203ENST00000378904 2122 ntBASIC17.66■□□□□ 0.42
SMARCD2Q92925 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCD2Q92925 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
SMARCD2Q92925 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCD2Q92925 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCD2Q92925 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCD2Q92925 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCD2Q92925 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCD2Q92925 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.66■□□□□ 0.42
SMARCD2Q92925 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCD2Q92925 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.66■□□□□ 0.42
SMARCD2Q92925 TFAMP1-201ENST00000412727 736 ntBASIC17.66■□□□□ 0.42
SMARCD2Q92925 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.66■□□□□ 0.42
SMARCD2Q92925 AL592309.1-201ENST00000443127 649 ntBASIC17.66■□□□□ 0.42
SMARCD2Q92925 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.66■□□□□ 0.42
SMARCD2Q92925 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.66■□□□□ 0.42
SMARCD2Q92925 AC079140.1-201ENST00000508039 487 ntBASIC17.66■□□□□ 0.42
SMARCD2Q92925 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.66■□□□□ 0.42
SMARCD2Q92925 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.66■□□□□ 0.42
SMARCD2Q92925 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.66■□□□□ 0.42
SMARCD2Q92925 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCD2Q92925 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SMARCD2Q92925 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms