Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPGRQ92834 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPGRQ92834 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPGRQ92834 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.21■□□□□ 0.99
RPGRQ92834 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPGRQ92834 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.21■□□□□ 0.99
RPGRQ92834 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC21.21■□□□□ 0.99
RPGRQ92834 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC21.2■□□□□ 0.98
RPGRQ92834 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPGRQ92834 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPGRQ92834 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPGRQ92834 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
RPGRQ92834 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC21.2■□□□□ 0.98
RPGRQ92834 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.2■□□□□ 0.98
RPGRQ92834 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPGRQ92834 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPGRQ92834 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPGRQ92834 FAM58DP-201ENST00000428076 619 ntBASIC21.2■□□□□ 0.98
RPGRQ92834 INGX-202ENST00000489074 768 ntBASIC21.2■□□□□ 0.98
RPGRQ92834 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC21.2■□□□□ 0.98
RPGRQ92834 DUX4L17-201ENST00000557360 1267 ntBASIC21.2■□□□□ 0.98
RPGRQ92834 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC21.2■□□□□ 0.98
RPGRQ92834 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC21.2■□□□□ 0.98
RPGRQ92834 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC21.2■□□□□ 0.98
RPGRQ92834 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPGRQ92834 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.2■□□□□ 0.98
RPGRQ92834 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.2■□□□□ 0.98
RPGRQ92834 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RPGRQ92834 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPGRQ92834 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPGRQ92834 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPGRQ92834 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPGRQ92834 AC098818.2-201ENST00000564925 2320 ntBASIC21.2■□□□□ 0.98
RPGRQ92834 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.19■□□□□ 0.98
RPGRQ92834 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPGRQ92834 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPGRQ92834 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RPGRQ92834 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPGRQ92834 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.19■□□□□ 0.98
RPGRQ92834 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RPGRQ92834 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RPGRQ92834 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPGRQ92834 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC21.19■□□□□ 0.98
RPGRQ92834 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPGRQ92834 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RPGRQ92834 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
RPGRQ92834 BX323043.1-201ENST00000641006 1765 ntBASIC21.19■□□□□ 0.98
RPGRQ92834 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
RPGRQ92834 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPGRQ92834 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC21.19■□□□□ 0.98
RPGRQ92834 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RPGRQ92834 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC21.19■□□□□ 0.98
RPGRQ92834 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC21.19■□□□□ 0.98
RPGRQ92834 MMP17-203ENST00000535004 719 ntTSL 3 BASIC21.19■□□□□ 0.98
RPGRQ92834 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
RPGRQ92834 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC21.19■□□□□ 0.98
RPGRQ92834 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC21.19■□□□□ 0.98
RPGRQ92834 AL161645.1-201ENST00000622716 1255 ntBASIC21.19■□□□□ 0.98
RPGRQ92834 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RPGRQ92834 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPGRQ92834 AKAP8P1-201ENST00000434743 1349 ntBASIC21.19■□□□□ 0.98
RPGRQ92834 BSG-215ENST00000618006 1329 ntTSL 2 BASIC21.19■□□□□ 0.98
RPGRQ92834 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RPGRQ92834 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RPGRQ92834 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPGRQ92834 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC21.19■□□□□ 0.98
RPGRQ92834 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RPGRQ92834 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPGRQ92834 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPGRQ92834 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPGRQ92834 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RPGRQ92834 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RPGRQ92834 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPGRQ92834 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPGRQ92834 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RPGRQ92834 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RPGRQ92834 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPGRQ92834 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPGRQ92834 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC21.18■□□□□ 0.98
RPGRQ92834 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RPGRQ92834 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC21.18■□□□□ 0.98
RPGRQ92834 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RPGRQ92834 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC21.18■□□□□ 0.98
RPGRQ92834 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPGRQ92834 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC21.18■□□□□ 0.98
RPGRQ92834 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC21.18■□□□□ 0.98
RPGRQ92834 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPGRQ92834 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
RPGRQ92834 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.18■□□□□ 0.98
RPGRQ92834 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RPGRQ92834 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
RPGRQ92834 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPGRQ92834 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC21.18■□□□□ 0.98
RPGRQ92834 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC21.18■□□□□ 0.98
RPGRQ92834 HNRNPRP1-201ENST00000453465 1695 ntBASIC21.18■□□□□ 0.98
RPGRQ92834 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPGRQ92834 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.18■□□□□ 0.98
RPGRQ92834 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPGRQ92834 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.17■□□□□ 0.98
RPGRQ92834 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms