Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 AC106795.1-205ENST00000512851 1056 ntBASIC15.18■□□□□ 0.02
CPEB3Q8NE35 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 KRT126P-201ENST00000549467 1181 ntBASIC15.18■□□□□ 0.02
CPEB3Q8NE35 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPEB3Q8NE35 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 AC016396.2-201ENST00000562575 1417 ntBASIC15.17■□□□□ 0.02
CPEB3Q8NE35 AC148477.5-201ENST00000625164 1645 ntBASIC15.17■□□□□ 0.02
CPEB3Q8NE35 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 SPDYE21P-201ENST00000413323 827 ntBASIC15.17■□□□□ 0.02
CPEB3Q8NE35 AL450487.1-201ENST00000426799 995 ntBASIC15.17■□□□□ 0.02
CPEB3Q8NE35 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.17■□□□□ 0.02
CPEB3Q8NE35 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 IFNL4P1-201ENST00000607083 540 ntBASIC15.17■□□□□ 0.02
CPEB3Q8NE35 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPEB3Q8NE35 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 AKR1C7P-201ENST00000305623 895 ntBASIC15.16■□□□□ 0.02
CPEB3Q8NE35 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CPEB3Q8NE35 REXO1L6P-202ENST00000619970 1078 ntBASIC15.16■□□□□ 0.02
CPEB3Q8NE35 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms