Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SPDYE10P-202ENST00000612005 668 ntBASIC17.7■□□□□ 0.42
SIX5Q8N196 SPDYE8P-202ENST00000612377 668 ntBASIC17.7■□□□□ 0.42
SIX5Q8N196 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.7■□□□□ 0.42
SIX5Q8N196 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIX5Q8N196 NEFHP1-201ENST00000412845 2629 ntBASIC17.7■□□□□ 0.42
SIX5Q8N196 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX5Q8N196 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SIX5Q8N196 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.7■□□□□ 0.42
SIX5Q8N196 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SIX5Q8N196 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.7■□□□□ 0.42
SIX5Q8N196 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX5Q8N196 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.7■□□□□ 0.42
SIX5Q8N196 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SIX5Q8N196 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIX5Q8N196 AL133373.2-201ENST00000623187 2828 ntBASIC17.7■□□□□ 0.42
SIX5Q8N196 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX5Q8N196 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SIX5Q8N196 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX5Q8N196 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.7■□□□□ 0.42
SIX5Q8N196 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX5Q8N196 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SIX5Q8N196 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX5Q8N196 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
SIX5Q8N196 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.69■□□□□ 0.42
SIX5Q8N196 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX5Q8N196 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX5Q8N196 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX5Q8N196 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SIX5Q8N196 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX5Q8N196 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX5Q8N196 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
SIX5Q8N196 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.69■□□□□ 0.42
SIX5Q8N196 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX5Q8N196 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SIX5Q8N196 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX5Q8N196 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.69■□□□□ 0.42
SIX5Q8N196 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX5Q8N196 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX5Q8N196 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX5Q8N196 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX5Q8N196 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
SIX5Q8N196 GAPDHP21-201ENST00000450301 1010 ntBASIC17.69■□□□□ 0.42
SIX5Q8N196 FAM86C2P-203ENST00000528684 1004 ntBASIC17.69■□□□□ 0.42
SIX5Q8N196 AC051619.7-201ENST00000568314 623 ntBASIC17.69■□□□□ 0.42
SIX5Q8N196 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.69■□□□□ 0.42
SIX5Q8N196 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX5Q8N196 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
SIX5Q8N196 AL139384.1-201ENST00000612143 3047 ntBASIC17.69■□□□□ 0.42
SIX5Q8N196 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SIX5Q8N196 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX5Q8N196 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX5Q8N196 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SIX5Q8N196 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX5Q8N196 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX5Q8N196 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX5Q8N196 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.69■□□□□ 0.42
SIX5Q8N196 TUBB3P1-201ENST00000405796 1332 ntBASIC17.69■□□□□ 0.42
SIX5Q8N196 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX5Q8N196 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX5Q8N196 AC005332.7-201ENST00000614046 2005 ntBASIC17.69■□□□□ 0.42
SIX5Q8N196 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SIX5Q8N196 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX5Q8N196 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIX5Q8N196 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SIX5Q8N196 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.68■□□□□ 0.42
SIX5Q8N196 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIX5Q8N196 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIX5Q8N196 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SIX5Q8N196 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIX5Q8N196 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SIX5Q8N196 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIX5Q8N196 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIX5Q8N196 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIX5Q8N196 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.68■□□□□ 0.42
SIX5Q8N196 MIR661-201ENST00000384842 89 ntBASIC17.68■□□□□ 0.42
SIX5Q8N196 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.68■□□□□ 0.42
SIX5Q8N196 AL592309.1-201ENST00000443127 649 ntBASIC17.68■□□□□ 0.42
SIX5Q8N196 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SIX5Q8N196 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SIX5Q8N196 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.68■□□□□ 0.42
SIX5Q8N196 ACTL9-202ENST00000612068 1252 ntBASIC17.68■□□□□ 0.42
SIX5Q8N196 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.68■□□□□ 0.42
SIX5Q8N196 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.68■□□□□ 0.42
SIX5Q8N196 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIX5Q8N196 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIX5Q8N196 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIX5Q8N196 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SIX5Q8N196 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SIX5Q8N196 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SIX5Q8N196 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIX5Q8N196 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.68■□□□□ 0.42
SIX5Q8N196 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.68■□□□□ 0.42
SIX5Q8N196 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIX5Q8N196 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIX5Q8N196 AC100803.2-201ENST00000562459 1963 ntBASIC17.68■□□□□ 0.42
SIX5Q8N196 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX5Q8N196 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX5Q8N196 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.67■□□□□ 0.42
SIX5Q8N196 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.67■□□□□ 0.42
SIX5Q8N196 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms