Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CSMD3Q7Z407 AL671277.1-201ENST00000429656 993 ntBASIC11.92□□□□□ -0.5
CSMD3Q7Z407 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CSMD3Q7Z407 GPR53P-205ENST00000457298 1084 ntBASIC11.92□□□□□ -0.5
CSMD3Q7Z407 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC11.92□□□□□ -0.5
CSMD3Q7Z407 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC11.92□□□□□ -0.5
CSMD3Q7Z407 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC11.92□□□□□ -0.5
CSMD3Q7Z407 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CSMD3Q7Z407 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CSMD3Q7Z407 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CSMD3Q7Z407 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CSMD3Q7Z407 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CSMD3Q7Z407 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CSMD3Q7Z407 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC11.91□□□□□ -0.5
CSMD3Q7Z407 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC11.91□□□□□ -0.5
CSMD3Q7Z407 PARP8-206ENST00000503665 572 ntTSL 4 BASIC11.91□□□□□ -0.5
CSMD3Q7Z407 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC11.91□□□□□ -0.5
CSMD3Q7Z407 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC11.91□□□□□ -0.5
CSMD3Q7Z407 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CSMD3Q7Z407 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC11.91□□□□□ -0.5
CSMD3Q7Z407 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
CSMD3Q7Z407 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CSMD3Q7Z407 DGCR5-201ENST00000399539 862 ntBASIC11.91□□□□□ -0.5
CSMD3Q7Z407 Six3os1_5.1-201ENST00000611000 271 ntBASIC11.91□□□□□ -0.5
CSMD3Q7Z407 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CSMD3Q7Z407 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CSMD3Q7Z407 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CSMD3Q7Z407 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CSMD3Q7Z407 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CSMD3Q7Z407 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CSMD3Q7Z407 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CSMD3Q7Z407 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CSMD3Q7Z407 AC009407.1-201ENST00000568958 598 ntBASIC11.91□□□□□ -0.5
CSMD3Q7Z407 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CSMD3Q7Z407 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CSMD3Q7Z407 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CSMD3Q7Z407 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 AC004790.1-201ENST00000612686 536 ntBASIC11.9□□□□□ -0.5
CSMD3Q7Z407 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 AC093503.3-201ENST00000624917 2352 ntBASIC11.9□□□□□ -0.5
CSMD3Q7Z407 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 SLC25A6P5-201ENST00000435663 894 ntBASIC11.9□□□□□ -0.5
CSMD3Q7Z407 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 MIR4453-201ENST00000584019 89 ntBASIC11.9□□□□□ -0.5
CSMD3Q7Z407 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC11.9□□□□□ -0.5
CSMD3Q7Z407 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CSMD3Q7Z407 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
CSMD3Q7Z407 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
CSMD3Q7Z407 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
CSMD3Q7Z407 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 MIR4525-201ENST00000580000 75 ntBASIC11.89□□□□□ -0.51
CSMD3Q7Z407 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC11.89□□□□□ -0.51
CSMD3Q7Z407 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms