Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 AP000867.4-201ENST00000641616 219 ntBASIC19.54■□□□□ 0.72
SHC4Q6S5L8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SHC4Q6S5L8 AC092171.3-201ENST00000610122 2651 ntBASIC19.53■□□□□ 0.72
SHC4Q6S5L8 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.53■□□□□ 0.72
SHC4Q6S5L8 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SHC4Q6S5L8 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.53■□□□□ 0.72
SHC4Q6S5L8 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.53■□□□□ 0.72
SHC4Q6S5L8 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHC4Q6S5L8 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHC4Q6S5L8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHC4Q6S5L8 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SHC4Q6S5L8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SHC4Q6S5L8 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHC4Q6S5L8 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SHC4Q6S5L8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
SHC4Q6S5L8 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.53■□□□□ 0.72
SHC4Q6S5L8 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.53■□□□□ 0.72
SHC4Q6S5L8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.53■□□□□ 0.72
SHC4Q6S5L8 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.53■□□□□ 0.72
SHC4Q6S5L8 AC114341.1-201ENST00000618070 349 ntBASIC19.53■□□□□ 0.72
SHC4Q6S5L8 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.53■□□□□ 0.72
SHC4Q6S5L8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SHC4Q6S5L8 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SHC4Q6S5L8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHC4Q6S5L8 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHC4Q6S5L8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHC4Q6S5L8 TNRC18P3-201ENST00000441896 2691 ntBASIC19.53■□□□□ 0.72
SHC4Q6S5L8 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHC4Q6S5L8 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHC4Q6S5L8 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.53■□□□□ 0.72
SHC4Q6S5L8 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
SHC4Q6S5L8 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHC4Q6S5L8 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 KRT18P35-201ENST00000510488 1269 ntBASIC19.52■□□□□ 0.72
SHC4Q6S5L8 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SHC4Q6S5L8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SHC4Q6S5L8 BCL2-203ENST00000589955 5011 ntBASIC19.52■□□□□ 0.71
SHC4Q6S5L8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.52■□□□□ 0.71
SHC4Q6S5L8 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
SHC4Q6S5L8 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
SHC4Q6S5L8 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SHC4Q6S5L8 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.52■□□□□ 0.71
SHC4Q6S5L8 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SHC4Q6S5L8 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SHC4Q6S5L8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHC4Q6S5L8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms