Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC144831.1-201ENST00000573312 2656 ntBASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 AC092171.3-201ENST00000610122 2651 ntBASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 AL645929.1-201ENST00000420084 975 ntBASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 MYLKP1-201ENST00000509077 1580 ntBASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXR1Q6PIV2 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 AC092597.1-201ENST00000487352 616 ntBASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 MIR3652-201ENST00000579335 131 ntBASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 AC024243.1-201ENST00000609234 778 ntBASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 BCL2-203ENST00000589955 5011 ntBASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
FOXR1Q6PIV2 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 ATP5G2P1-201ENST00000433580 426 ntBASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 AC034232.1-201ENST00000506026 1064 ntBASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 AC092329.2-201ENST00000598402 547 ntBASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
FOXR1Q6PIV2 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms