Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 FAM87A-204ENST00000613235 858 ntBASIC15.18■□□□□ 0.02
C11orf88Q6PI97 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C11orf88Q6PI97 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 AC010203.1-204ENST00000548782 407 ntBASIC15.17■□□□□ 0.02
C11orf88Q6PI97 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.17■□□□□ 0.02
C11orf88Q6PI97 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 AL109659.2-201ENST00000606809 1674 ntBASIC15.16■□□□□ 0.02
C11orf88Q6PI97 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C11orf88Q6PI97 AP000523.1-201ENST00000398242 1049 ntBASIC15.16■□□□□ 0.02
C11orf88Q6PI97 AK4P3-201ENST00000418260 669 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms