Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ALFQ53S48 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
ALFQ53S48 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ALFQ53S48 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ALFQ53S48 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
ALFQ53S48 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.81■□□□□ 0.44
ALFQ53S48 AC141586.5-201ENST00000624546 2050 ntBASIC17.81■□□□□ 0.44
ALFQ53S48 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALFQ53S48 AC026471.1-201ENST00000564629 3026 ntBASIC17.81■□□□□ 0.44
ALFQ53S48 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALFQ53S48 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALFQ53S48 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALFQ53S48 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.81■□□□□ 0.44
ALFQ53S48 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALFQ53S48 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ALFQ53S48 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
ALFQ53S48 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.81■□□□□ 0.44
ALFQ53S48 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALFQ53S48 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.81■□□□□ 0.44
ALFQ53S48 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.81■□□□□ 0.44
ALFQ53S48 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.81■□□□□ 0.44
ALFQ53S48 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.81■□□□□ 0.44
ALFQ53S48 AC116407.3-201ENST00000623905 1129 ntBASIC17.81■□□□□ 0.44
ALFQ53S48 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
ALFQ53S48 AC006504.4-201ENST00000592118 1568 ntBASIC17.81■□□□□ 0.44
ALFQ53S48 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALFQ53S48 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALFQ53S48 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALFQ53S48 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.81■□□□□ 0.44
ALFQ53S48 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.81■□□□□ 0.44
ALFQ53S48 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALFQ53S48 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALFQ53S48 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
ALFQ53S48 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
ALFQ53S48 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.81■□□□□ 0.44
ALFQ53S48 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ALFQ53S48 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ALFQ53S48 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ALFQ53S48 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.8■□□□□ 0.44
ALFQ53S48 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALFQ53S48 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALFQ53S48 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.8■□□□□ 0.44
ALFQ53S48 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.8■□□□□ 0.44
ALFQ53S48 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALFQ53S48 RPS2P28-201ENST00000314255 741 ntBASIC17.8■□□□□ 0.44
ALFQ53S48 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.8■□□□□ 0.44
ALFQ53S48 AC073621.1-201ENST00000392730 636 ntBASIC17.8■□□□□ 0.44
ALFQ53S48 ELK2BP-201ENST00000415014 1224 ntBASIC17.8■□□□□ 0.44
ALFQ53S48 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.8■□□□□ 0.44
ALFQ53S48 ACTG1P4-201ENST00000425123 1122 ntBASIC17.8■□□□□ 0.44
ALFQ53S48 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.8■□□□□ 0.44
ALFQ53S48 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.8■□□□□ 0.44
ALFQ53S48 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.8■□□□□ 0.44
ALFQ53S48 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.8■□□□□ 0.44
ALFQ53S48 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.8■□□□□ 0.44
ALFQ53S48 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.8■□□□□ 0.44
ALFQ53S48 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.8■□□□□ 0.44
ALFQ53S48 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
ALFQ53S48 AL353135.1-201ENST00000606729 504 ntBASIC17.8■□□□□ 0.44
ALFQ53S48 AL139424.1-201ENST00000607572 797 ntBASIC17.8■□□□□ 0.44
ALFQ53S48 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
ALFQ53S48 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ALFQ53S48 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.8■□□□□ 0.44
ALFQ53S48 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALFQ53S48 AC139713.2-201ENST00000641328 2723 ntBASIC17.8■□□□□ 0.44
ALFQ53S48 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.8■□□□□ 0.44
ALFQ53S48 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALFQ53S48 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALFQ53S48 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALFQ53S48 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
ALFQ53S48 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.8■□□□□ 0.44
ALFQ53S48 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.8■□□□□ 0.44
ALFQ53S48 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ALFQ53S48 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALFQ53S48 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ALFQ53S48 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
ALFQ53S48 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.79■□□□□ 0.44
ALFQ53S48 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.79■□□□□ 0.44
ALFQ53S48 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.79■□□□□ 0.44
ALFQ53S48 AC092910.1-201ENST00000482027 1129 ntBASIC17.79■□□□□ 0.44
ALFQ53S48 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.79■□□□□ 0.44
ALFQ53S48 AC105339.3-201ENST00000560043 636 ntBASIC17.79■□□□□ 0.44
ALFQ53S48 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.79■□□□□ 0.44
ALFQ53S48 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.79■□□□□ 0.44
ALFQ53S48 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.79■□□□□ 0.44
ALFQ53S48 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.79■□□□□ 0.44
ALFQ53S48 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ALFQ53S48 AC006557.2-201ENST00000592985 1240 ntBASIC17.79■□□□□ 0.44
ALFQ53S48 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALFQ53S48 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.79■□□□□ 0.44
ALFQ53S48 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ALFQ53S48 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ALFQ53S48 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALFQ53S48 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
ALFQ53S48 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
ALFQ53S48 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALFQ53S48 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.79■□□□□ 0.44
ALFQ53S48 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALFQ53S48 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.78■□□□□ 0.44
ALFQ53S48 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms