Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM35AQ53FP2 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM35AQ53FP2 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM35AQ53FP2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 BX005266.1-201ENST00000473402 457 ntBASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 IFNL4P1-201ENST00000607083 540 ntBASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM35AQ53FP2 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TMEM35AQ53FP2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TMEM35AQ53FP2 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
TMEM35AQ53FP2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TMEM35AQ53FP2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TMEM35AQ53FP2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM35AQ53FP2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM35AQ53FP2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.45■□□□□ 0.22
TMEM35AQ53FP2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEM35AQ53FP2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TMEM35AQ53FP2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM35AQ53FP2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM35AQ53FP2 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.45■□□□□ 0.22
TMEM35AQ53FP2 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM35AQ53FP2 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEM35AQ53FP2 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM35AQ53FP2 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.45■□□□□ 0.22
TMEM35AQ53FP2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.45■□□□□ 0.22
TMEM35AQ53FP2 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TMEM35AQ53FP2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM35AQ53FP2 GPR89P-201ENST00000407924 1495 ntBASIC16.45■□□□□ 0.22
TMEM35AQ53FP2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.45■□□□□ 0.22
TMEM35AQ53FP2 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM35AQ53FP2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM35AQ53FP2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM35AQ53FP2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM35AQ53FP2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TMEM35AQ53FP2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM35AQ53FP2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM35AQ53FP2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM35AQ53FP2 AC004817.3-201ENST00000602957 2129 ntBASIC16.45■□□□□ 0.22
TMEM35AQ53FP2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEM35AQ53FP2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
TMEM35AQ53FP2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM35AQ53FP2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TMEM35AQ53FP2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM35AQ53FP2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TMEM35AQ53FP2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM35AQ53FP2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.44■□□□□ 0.22
TMEM35AQ53FP2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TMEM35AQ53FP2 FZD10-202ENST00000539839 3282 ntBASIC16.44■□□□□ 0.22
TMEM35AQ53FP2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM35AQ53FP2 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.44■□□□□ 0.22
TMEM35AQ53FP2 AKR1C7P-201ENST00000305623 895 ntBASIC16.44■□□□□ 0.22
TMEM35AQ53FP2 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM35AQ53FP2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM35AQ53FP2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
TMEM35AQ53FP2 LINC00982-205ENST00000420957 435 ntBASIC16.44■□□□□ 0.22
TMEM35AQ53FP2 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM35AQ53FP2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.44■□□□□ 0.22
TMEM35AQ53FP2 AC124947.2-201ENST00000547118 1133 ntBASIC16.44■□□□□ 0.22
TMEM35AQ53FP2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TMEM35AQ53FP2 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.44■□□□□ 0.22
TMEM35AQ53FP2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.44■□□□□ 0.22
TMEM35AQ53FP2 AL589182.2-201ENST00000619332 1049 ntBASIC16.44■□□□□ 0.22
TMEM35AQ53FP2 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms