Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC11.21□□□□□ -0.617e-7■□□□□ 8.2
SRSF1Q07955 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.677e-7■□□□□ 8.2
SRSF1Q07955 SF3B6-201ENST00000233468 770 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.77e-7■□□□□ 8.2
SRSF1Q07955 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.747e-7■□□□□ 8.2
SRSF1Q07955 RBMX-206ENST00000561733 837 ntTSL 310.28□□□□□ -0.767e-7■□□□□ 8.2
SRSF1Q07955 NUP54-203ENST00000504173 314 ntTSL 310.14□□□□□ -0.797e-7■□□□□ 8.2
SRSF1Q07955 UTP3-201ENST00000254803 2073 ntAPPRIS P1 BASIC10.06□□□□□ -0.87e-7■□□□□ 8.2
SRSF1Q07955 TMC6-217ENST00000590934 386 ntTSL 510.05□□□□□ -0.84e-11■□□□□ 8.2
SRSF1Q07955 NUP54-211ENST00000512151 1385 ntTSL 29.99□□□□□ -0.817e-7■□□□□ 8.2
SRSF1Q07955 TANGO2-225ENST00000490121 125 ntTSL 39.79□□□□□ -0.847e-7■□□□□ 8.2
SRSF1Q07955 NUP54-202ENST00000502850 1604 ntTSL 1 (best)9.67□□□□□ -0.867e-7■□□□□ 8.2
SRSF1Q07955 ZNF767P-205ENST00000493198 501 ntTSL 29.67□□□□□ -0.867e-7■□□□□ 8.2
SRSF1Q07955 NUP54-207ENST00000508583 521 ntTSL 58.23□□□□□ -1.097e-7■□□□□ 8.2
SRSF1Q07955 ZNF767P-203ENST00000481762 357 ntTSL 37.93□□□□□ -1.147e-7■□□□□ 8.2
SRSF1Q07955 LARS-214ENST00000512412 575 ntTSL 57.56□□□□□ -1.27e-7■□□□□ 8.2
SRSF1Q07955 UQCRB-208ENST00000521948 997 ntTSL 26.75□□□□□ -1.337e-7■□□□□ 8.2
SRSF1Q07955 NUP54-204ENST00000506098 548 ntTSL 46.25□□□□□ -1.417e-7■□□□□ 8.2
SRSF1Q07955 NUP54-209ENST00000510569 494 ntTSL 56.16□□□□□ -1.427e-7■□□□□ 8.2
SRSF1Q07955 NUP54-210ENST00000510884 441 ntTSL 36.16□□□□□ -1.427e-7■□□□□ 8.2
SRSF1Q07955 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.06□□□□□ -1.447e-7■□□□□ 8.2
SRSF1Q07955 NUP54-218ENST00000515460 849 ntTSL 35.82□□□□□ -1.487e-7■□□□□ 8.2
SRSF1Q07955 UQCRB-205ENST00000518876 3968 ntTSL 1 (best)5.58□□□□□ -1.527e-7■□□□□ 8.2
SRSF1Q07955 RBMX-205ENST00000496459 2041 ntTSL 25.38□□□□□ -1.557e-7■□□□□ 8.2
SRSF1Q07955 UQCRB-203ENST00000517603 1041 ntTSL 1 (best)5.21□□□□□ -1.587e-7■□□□□ 8.2
SRSF1Q07955 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.13□□□□□ -1.597e-7■□□□□ 8.2
SRSF1Q07955 UQCRB-207ENST00000521036 982 ntTSL 24.99□□□□□ -1.617e-7■□□□□ 8.2
SRSF1Q07955 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.92□□□□□ -1.947e-7■□□□□ 8.2
SRSF1Q07955 TAL1-203ENST00000459729 1796 ntTSL 1 (best)18.92■□□□□ 0.621e-7■□□□□ 8.2
SRSF1Q07955 MED15-206ENST00000420849 430 ntTSL 316.5■□□□□ 0.231e-7■□□□□ 8.2
SRSF1Q07955 MED15-207ENST00000423862 581 ntTSL 316.25■□□□□ 0.191e-7■□□□□ 8.2
SRSF1Q07955 MED15-224ENST00000476767 590 ntTSL 415.78■□□□□ 0.121e-7■□□□□ 8.2
SRSF1Q07955 MED15-219ENST00000457322 623 ntTSL 415.33■□□□□ 0.041e-7■□□□□ 8.2
SRSF1Q07955 MED15-228ENST00000487550 587 ntTSL 315.11■□□□□ 0.011e-7■□□□□ 8.2
SRSF1Q07955 MED15-208ENST00000424287 589 ntTSL 415.08■□□□□ 01e-7■□□□□ 8.2
SRSF1Q07955 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.011e-7■□□□□ 8.2
SRSF1Q07955 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.11e-7■□□□□ 8.2
SRSF1Q07955 RNF168-202ENST00000437070 2202 ntTSL 213.96□□□□□ -0.171e-7■□□□□ 8.2
SRSF1Q07955 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.311e-7■□□□□ 8.2
SRSF1Q07955 MED15-209ENST00000428629 572 ntTSL 47.6□□□□□ -1.191e-7■□□□□ 8.2
SRSF1Q07955 SNRNP70-205ENST00000597936 580 ntTSL 217.73■□□□□ 0.432e-6■□□□□ 8.2
SRSF1Q07955 SNRNP70-207ENST00000598984 547 ntTSL 517.09■□□□□ 0.332e-6■□□□□ 8.2
SRSF1Q07955 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.592e-6■□□□□ 8.2
SRSF1Q07955 SLC7A5P2-201ENST00000553010 536 ntBASIC19.81■□□□□ 0.763e-10■□□□□ 8.2
SRSF1Q07955 SMG1P3-202ENST00000437413 589 ntTSL 419.74■□□□□ 0.753e-10■□□□□ 8.2
SRSF1Q07955 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC12.27□□□□□ -0.443e-10■□□□□ 8.2
SRSF1Q07955 GNAS-256ENST00000603546 573 ntTSL 526.24■■□□□ 1.796e-6■□□□□ 8.1
SRSF1Q07955 GNAS-233ENST00000476935 828 ntTSL 322.49■■□□□ 1.196e-6■□□□□ 8.1
SRSF1Q07955 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.9■□□□□ 0.946e-6■□□□□ 8.1
SRSF1Q07955 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.9■□□□□ 0.946e-6■□□□□ 8.1
SRSF1Q07955 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.926e-6■□□□□ 8.1
SRSF1Q07955 GNAS-248ENST00000488652 953 ntTSL 520.15■□□□□ 0.826e-6■□□□□ 8.1
SRSF1Q07955 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.616e-6■□□□□ 8.1
SRSF1Q07955 FAF2-205ENST00000510730 684 ntTSL 318.04■□□□□ 0.486e-6■□□□□ 8.1
SRSF1Q07955 GNAS-220ENST00000461152 278 ntTSL 517.64■□□□□ 0.416e-6■□□□□ 8.1
SRSF1Q07955 PISD-214ENST00000478893 1056 ntTSL 217■□□□□ 0.316e-6■□□□□ 8.1
SRSF1Q07955 SUN1-217ENST00000450538 570 ntTSL 415.42■□□□□ 0.066e-6■□□□□ 8.1
SRSF1Q07955 PISD-213ENST00000474017 1760 ntTSL 514.69□□□□□ -0.066e-6■□□□□ 8.1
SRSF1Q07955 SUN1-211ENST00000427969 520 ntTSL 414.5□□□□□ -0.096e-6■□□□□ 8.1
SRSF1Q07955 PISD-217ENST00000491342 692 ntTSL 514.19□□□□□ -0.146e-6■□□□□ 8.1
SRSF1Q07955 PREPL-215ENST00000540817 560 ntTSL 413.2□□□□□ -0.36e-6■□□□□ 8.1
SRSF1Q07955 SUN1-215ENST00000439679 626 ntTSL 512.99□□□□□ -0.336e-6■□□□□ 8.1
SRSF1Q07955 HNRNPR-213ENST00000641107 646 nt12.81□□□□□ -0.366e-6■□□□□ 8.1
SRSF1Q07955 PISD-212ENST00000473770 2378 ntTSL 512.61□□□□□ -0.396e-6■□□□□ 8.1
SRSF1Q07955 PHF1-205ENST00000428274 836 ntTSL 512.47□□□□□ -0.416e-6■□□□□ 8.1
SRSF1Q07955 DNM2-215ENST00000590806 5651 ntTSL 212.38□□□□□ -0.437e-9■□□□□ 8.1
SRSF1Q07955 GNAS-205ENST00000338783 641 ntTSL 312.27□□□□□ -0.456e-6■□□□□ 8.1
SRSF1Q07955 PREPL-214ENST00000477410 511 ntTSL 411.97□□□□□ -0.496e-6■□□□□ 8.1
SRSF1Q07955 PHF1-210ENST00000488767 849 ntTSL 311.78□□□□□ -0.526e-6■□□□□ 8.1
SRSF1Q07955 NAMPT-203ENST00000393618 592 ntTSL 411.77□□□□□ -0.536e-6■□□□□ 8.1
SRSF1Q07955 NAMPT-205ENST00000424768 1147 ntTSL 411.63□□□□□ -0.556e-6■□□□□ 8.1
SRSF1Q07955 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.556e-6■□□□□ 8.1
SRSF1Q07955 SKIV2L-215ENST00000494058 867 ntTSL 211.61□□□□□ -0.556e-6■□□□□ 8.1
SRSF1Q07955 GNAS-209ENST00000371081 730 ntTSL 2 BASIC11.41□□□□□ -0.586e-6■□□□□ 8.1
SRSF1Q07955 PISD-211ENST00000460723 2534 ntTSL 1 (best)10.85□□□□□ -0.676e-6■□□□□ 8.1
SRSF1Q07955 NAMPT-206ENST00000441045 589 ntTSL 410.68□□□□□ -0.76e-6■□□□□ 8.1
SRSF1Q07955 PISD-204ENST00000422020 1015 ntTSL 510.66□□□□□ -0.76e-6■□□□□ 8.1
SRSF1Q07955 NAMPT-213ENST00000491027 1009 ntTSL 210.18□□□□□ -0.786e-6■□□□□ 8.1
SRSF1Q07955 SKIV2L-203ENST00000461915 691 ntTSL 510.04□□□□□ -0.86e-6■□□□□ 8.1
SRSF1Q07955 ZNF529-205ENST00000586115 587 ntTSL 410.03□□□□□ -0.86e-6■□□□□ 8.1
SRSF1Q07955 PISD-203ENST00000397500 2194 ntTSL 5 BASIC9.89□□□□□ -0.836e-6■□□□□ 8.1
SRSF1Q07955 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.836e-6■□□□□ 8.1
SRSF1Q07955 PISD-202ENST00000382151 2669 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.856e-6■□□□□ 8.1
SRSF1Q07955 PISD-207ENST00000435900 1723 ntTSL 59.53□□□□□ -0.886e-6■□□□□ 8.1
SRSF1Q07955 PISD-208ENST00000437808 2264 ntTSL 59.43□□□□□ -0.96e-6■□□□□ 8.1
SRSF1Q07955 ZNF529-203ENST00000585960 535 ntTSL 49.43□□□□□ -0.96e-6■□□□□ 8.1
SRSF1Q07955 DNM2-214ENST00000590787 4299 ntTSL 29.26□□□□□ -0.937e-9■□□□□ 8.1
SRSF1Q07955 NAMPT-204ENST00000417537 300 ntTSL 48.98□□□□□ -0.976e-6■□□□□ 8.1
SRSF1Q07955 NAMPT-201ENST00000222553 4582 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.996e-6■□□□□ 8.1
SRSF1Q07955 GNAS-251ENST00000492907 790 ntTSL 38.79□□□□□ -16e-6■□□□□ 8.1
SRSF1Q07955 PISD-201ENST00000266095 2655 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.016e-6■□□□□ 8.1
SRSF1Q07955 NAMPT-212ENST00000489732 1976 ntTSL 28.51□□□□□ -1.056e-6■□□□□ 8.1
SRSF1Q07955 ZNF529-201ENST00000334116 5238 ntTSL 2 BASIC8.39□□□□□ -1.076e-6■□□□□ 8.1
SRSF1Q07955 HNRNPR-206ENST00000464516 557 ntTSL 28.04□□□□□ -1.126e-6■□□□□ 8.1
SRSF1Q07955 PREPL-212ENST00000438314 660 ntTSL 57.08□□□□□ -1.286e-6■□□□□ 8.1
SRSF1Q07955 PREPL-208ENST00000410081 3080 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.36e-6■□□□□ 8.1
SRSF1Q07955 PWWP2A-203ENST00000520662 407 ntTSL 36.81□□□□□ -1.326e-6■□□□□ 8.1
SRSF1Q07955 PREPL-204ENST00000409272 3030 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.356e-6■□□□□ 8.1
SRSF1Q07955 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.46e-6■□□□□ 8.1
SRSF1Q07955 ZNF529-204ENST00000585983 582 ntTSL 36.22□□□□□ -1.416e-6■□□□□ 8.1
SRSF1Q07955 FAF2-203ENST00000506061 337 ntTSL 35.81□□□□□ -1.486e-6■□□□□ 8.1
Retrieved 100 of 14,836 protein–RNA pairs in 56.6 ms