Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HSPG2P98160 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
HSPG2P98160 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HSPG2P98160 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HSPG2P98160 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HSPG2P98160 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HSPG2P98160 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
HSPG2P98160 RPL37AP1-201ENST00000412502 279 ntBASIC10.57□□□□□ -0.72
HSPG2P98160 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
HSPG2P98160 MYCLP2-201ENST00000449268 967 ntBASIC10.57□□□□□ -0.72
HSPG2P98160 AC103810.3-201ENST00000583567 96 ntBASIC10.57□□□□□ -0.72
HSPG2P98160 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC10.57□□□□□ -0.72
HSPG2P98160 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
HSPG2P98160 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC10.57□□□□□ -0.72
HSPG2P98160 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
HSPG2P98160 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC10.57□□□□□ -0.72
HSPG2P98160 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
HSPG2P98160 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC10.57□□□□□ -0.72
HSPG2P98160 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC10.57□□□□□ -0.72
HSPG2P98160 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
HSPG2P98160 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC10.57□□□□□ -0.72
HSPG2P98160 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC10.57□□□□□ -0.72
HSPG2P98160 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC10.57□□□□□ -0.72
HSPG2P98160 RARRES2P9-201ENST00000565168 469 ntBASIC10.57□□□□□ -0.72
HSPG2P98160 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
HSPG2P98160 TECR-220ENST00000600083 1204 ntTSL 2 BASIC10.57□□□□□ -0.72
HSPG2P98160 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC10.57□□□□□ -0.72
HSPG2P98160 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC10.57□□□□□ -0.72
HSPG2P98160 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC10.57□□□□□ -0.72
HSPG2P98160 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
HSPG2P98160 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC10.57□□□□□ -0.72
HSPG2P98160 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC10.57□□□□□ -0.72
HSPG2P98160 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
HSPG2P98160 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
HSPG2P98160 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
HSPG2P98160 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC10.57□□□□□ -0.72
HSPG2P98160 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
HSPG2P98160 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HSPG2P98160 ENSA-206ENST00000361631 725 ntTSL 2 BASIC10.57□□□□□ -0.72
HSPG2P98160 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
HSPG2P98160 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
HSPG2P98160 AC087499.6-201ENST00000411576 835 ntBASIC10.57□□□□□ -0.72
HSPG2P98160 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC10.57□□□□□ -0.72
HSPG2P98160 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC10.57□□□□□ -0.72
HSPG2P98160 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC10.57□□□□□ -0.72
HSPG2P98160 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC10.57□□□□□ -0.72
HSPG2P98160 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC10.57□□□□□ -0.72
HSPG2P98160 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC10.57□□□□□ -0.72
HSPG2P98160 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HSPG2P98160 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HSPG2P98160 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HSPG2P98160 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC10.57□□□□□ -0.72
HSPG2P98160 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
HSPG2P98160 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
HSPG2P98160 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
HSPG2P98160 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
HSPG2P98160 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
HSPG2P98160 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
HSPG2P98160 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC10.56□□□□□ -0.72
HSPG2P98160 MIR4515-201ENST00000584082 81 ntBASIC10.56□□□□□ -0.72
HSPG2P98160 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC10.56□□□□□ -0.72
HSPG2P98160 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC10.56□□□□□ -0.72
HSPG2P98160 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
HSPG2P98160 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC10.56□□□□□ -0.72
HSPG2P98160 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
HSPG2P98160 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC10.56□□□□□ -0.72
HSPG2P98160 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
HSPG2P98160 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC10.56□□□□□ -0.72
HSPG2P98160 AL020996.1-203ENST00000536896 2307 ntBASIC10.56□□□□□ -0.72
HSPG2P98160 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC10.56□□□□□ -0.72
HSPG2P98160 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
HSPG2P98160 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
HSPG2P98160 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC10.56□□□□□ -0.72
HSPG2P98160 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
HSPG2P98160 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC10.56□□□□□ -0.72
HSPG2P98160 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
HSPG2P98160 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
HSPG2P98160 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
HSPG2P98160 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
HSPG2P98160 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
HSPG2P98160 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
HSPG2P98160 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC10.56□□□□□ -0.72
HSPG2P98160 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
HSPG2P98160 DOC2GP-202ENST00000514950 1163 ntBASIC10.56□□□□□ -0.72
HSPG2P98160 FTH1-202ENST00000526640 786 ntTSL 2 BASIC10.56□□□□□ -0.72
HSPG2P98160 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC10.56□□□□□ -0.72
HSPG2P98160 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC10.56□□□□□ -0.72
HSPG2P98160 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
HSPG2P98160 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
HSPG2P98160 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
HSPG2P98160 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC10.56□□□□□ -0.72
HSPG2P98160 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
HSPG2P98160 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC10.56□□□□□ -0.72
HSPG2P98160 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC10.56□□□□□ -0.72
HSPG2P98160 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
HSPG2P98160 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
HSPG2P98160 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
HSPG2P98160 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
HSPG2P98160 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC10.56□□□□□ -0.72
HSPG2P98160 MIR3909-201ENST00000579518 119 ntBASIC10.56□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms