Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.9■□□□□ 0.3
YBX1P67809 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
YBX1P67809 AC105020.1-201ENST00000435356 2205 ntBASIC16.9■□□□□ 0.3
YBX1P67809 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.9■□□□□ 0.3
YBX1P67809 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.9■□□□□ 0.3
YBX1P67809 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
YBX1P67809 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
YBX1P67809 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.9■□□□□ 0.3
YBX1P67809 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.9■□□□□ 0.3
YBX1P67809 FLJ38576-201ENST00000623820 2459 ntBASIC16.9■□□□□ 0.3
YBX1P67809 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.9■□□□□ 0.3
YBX1P67809 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.9■□□□□ 0.3
YBX1P67809 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
YBX1P67809 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
YBX1P67809 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
YBX1P67809 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
YBX1P67809 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
YBX1P67809 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
YBX1P67809 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
YBX1P67809 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
YBX1P67809 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.89■□□□□ 0.29
YBX1P67809 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
YBX1P67809 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.89■□□□□ 0.29
YBX1P67809 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.89■□□□□ 0.29
YBX1P67809 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
YBX1P67809 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
YBX1P67809 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
YBX1P67809 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
YBX1P67809 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
YBX1P67809 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.89■□□□□ 0.29
YBX1P67809 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
YBX1P67809 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
YBX1P67809 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
YBX1P67809 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
YBX1P67809 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
YBX1P67809 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
YBX1P67809 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
YBX1P67809 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
YBX1P67809 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.89■□□□□ 0.29
YBX1P67809 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.89■□□□□ 0.29
YBX1P67809 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
YBX1P67809 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
YBX1P67809 AC111152.3-201ENST00000569699 673 ntBASIC16.89■□□□□ 0.29
YBX1P67809 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
YBX1P67809 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
YBX1P67809 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.89■□□□□ 0.29
YBX1P67809 AC073592.5-201ENST00000624854 528 ntBASIC16.89■□□□□ 0.29
YBX1P67809 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.89■□□□□ 0.29
YBX1P67809 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
YBX1P67809 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
YBX1P67809 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.89■□□□□ 0.29
YBX1P67809 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
YBX1P67809 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
YBX1P67809 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
YBX1P67809 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
YBX1P67809 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
YBX1P67809 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
YBX1P67809 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
YBX1P67809 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
YBX1P67809 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
YBX1P67809 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.88■□□□□ 0.29
YBX1P67809 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
YBX1P67809 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
YBX1P67809 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
YBX1P67809 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
YBX1P67809 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
YBX1P67809 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.88■□□□□ 0.29
YBX1P67809 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.88■□□□□ 0.29
YBX1P67809 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
YBX1P67809 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.88■□□□□ 0.29
YBX1P67809 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
YBX1P67809 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
YBX1P67809 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
YBX1P67809 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
YBX1P67809 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
YBX1P67809 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.88■□□□□ 0.29
YBX1P67809 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
YBX1P67809 PCDHA14-201ENST00000506751 2298 ntBASIC16.88■□□□□ 0.29
YBX1P67809 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.88■□□□□ 0.29
YBX1P67809 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
YBX1P67809 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
YBX1P67809 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
YBX1P67809 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.88■□□□□ 0.29
YBX1P67809 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.88■□□□□ 0.29
YBX1P67809 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.88■□□□□ 0.29
YBX1P67809 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.88■□□□□ 0.29
YBX1P67809 AC106795.1-205ENST00000512851 1056 ntBASIC16.88■□□□□ 0.29
YBX1P67809 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
YBX1P67809 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
YBX1P67809 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.88■□□□□ 0.29
YBX1P67809 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.88■□□□□ 0.29
YBX1P67809 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
YBX1P67809 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
YBX1P67809 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
YBX1P67809 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.88■□□□□ 0.29
YBX1P67809 MTDHP3-201ENST00000594186 672 ntBASIC16.88■□□□□ 0.29
YBX1P67809 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
YBX1P67809 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
YBX1P67809 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
YBX1P67809 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms