Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
UBA52P62987 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
UBA52P62987 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.02□□□□□ -0.01
UBA52P62987 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.02□□□□□ -0.01
UBA52P62987 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.01□□□□□ -0.01
UBA52P62987 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.01□□□□□ -0.01
UBA52P62987 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
UBA52P62987 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
UBA52P62987 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.01□□□□□ -0.01
UBA52P62987 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.01□□□□□ -0.01
UBA52P62987 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.01□□□□□ -0.01
UBA52P62987 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.01□□□□□ -0.01
UBA52P62987 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.01□□□□□ -0.01
UBA52P62987 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
UBA52P62987 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
UBA52P62987 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
UBA52P62987 CHCHD2P8-201ENST00000429873 447 ntBASIC15.01□□□□□ -0.01
UBA52P62987 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 FDX1P1-201ENST00000449115 551 ntBASIC15.01□□□□□ -0.01
UBA52P62987 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.01□□□□□ -0.01
UBA52P62987 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.01□□□□□ -0.01
UBA52P62987 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.01□□□□□ -0.01
UBA52P62987 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.01□□□□□ -0.01
UBA52P62987 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.01□□□□□ -0.01
UBA52P62987 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.01□□□□□ -0.01
UBA52P62987 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.01□□□□□ -0.01
UBA52P62987 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
UBA52P62987 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.01□□□□□ -0.01
UBA52P62987 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
UBA52P62987 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
UBA52P62987 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
UBA52P62987 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.01□□□□□ -0.01
UBA52P62987 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
UBA52P62987 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.01□□□□□ -0.01
UBA52P62987 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.01□□□□□ -0.01
UBA52P62987 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBA52P62987 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
UBA52P62987 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
UBA52P62987 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15□□□□□ -0.01
UBA52P62987 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15□□□□□ -0.01
UBA52P62987 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UBA52P62987 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
UBA52P62987 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
UBA52P62987 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
UBA52P62987 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UBA52P62987 NFYC-AS1-201ENST00000606277 1687 ntBASIC15□□□□□ -0.01
UBA52P62987 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15□□□□□ -0.01
UBA52P62987 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UBA52P62987 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15□□□□□ -0.01
UBA52P62987 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
UBA52P62987 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
UBA52P62987 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15□□□□□ -0.01
UBA52P62987 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15□□□□□ -0.01
UBA52P62987 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
UBA52P62987 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
UBA52P62987 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
UBA52P62987 AL138688.1-201ENST00000624851 1594 ntBASIC15□□□□□ -0.01
UBA52P62987 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UBA52P62987 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UBA52P62987 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15□□□□□ -0.01
UBA52P62987 NUS1P1-201ENST00000446295 882 ntBASIC15□□□□□ -0.01
UBA52P62987 KRT17P6-201ENST00000453795 1220 ntBASIC15□□□□□ -0.01
UBA52P62987 SEC1P-202ENST00000473944 940 ntBASIC15□□□□□ -0.01
UBA52P62987 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15□□□□□ -0.01
UBA52P62987 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15□□□□□ -0.01
UBA52P62987 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15□□□□□ -0.01
UBA52P62987 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15□□□□□ -0.01
UBA52P62987 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
UBA52P62987 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms