Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.83■□□□□ 0.76
CHMP4BP1P59074 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHMP4BP1P59074 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.83■□□□□ 0.76
CHMP4BP1P59074 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHMP4BP1P59074 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHMP4BP1P59074 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.83■□□□□ 0.76
CHMP4BP1P59074 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHMP4BP1P59074 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CHMP4BP1P59074 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 RPS8P6-201ENST00000426177 609 ntBASIC19.82■□□□□ 0.76
CHMP4BP1P59074 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 KRT18P3-201ENST00000451602 1288 ntBASIC19.82■□□□□ 0.76
CHMP4BP1P59074 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.82■□□□□ 0.76
CHMP4BP1P59074 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP4BP1P59074 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 UNC93B6-202ENST00000528242 690 ntBASIC19.81■□□□□ 0.76
CHMP4BP1P59074 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 AP000867.4-201ENST00000641616 219 ntBASIC19.81■□□□□ 0.76
CHMP4BP1P59074 AC107918.4-202ENST00000641623 219 ntBASIC19.81■□□□□ 0.76
CHMP4BP1P59074 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.81■□□□□ 0.76
CHMP4BP1P59074 AC093677.2-201ENST00000600169 1863 ntBASIC19.81■□□□□ 0.76
CHMP4BP1P59074 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP4BP1P59074 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CHMP4BP1P59074 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP4BP1P59074 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CHMP4BP1P59074 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP4BP1P59074 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP4BP1P59074 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP4BP1P59074 AC084018.2-201ENST00000613093 2607 ntBASIC19.8■□□□□ 0.76
CHMP4BP1P59074 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP4BP1P59074 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.8■□□□□ 0.76
CHMP4BP1P59074 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP4BP1P59074 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CHMP4BP1P59074 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.8■□□□□ 0.76
CHMP4BP1P59074 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms