Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.93■□□□□ 0.14
CLDN20P56880 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CLDN20P56880 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CLDN20P56880 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.93■□□□□ 0.14
CLDN20P56880 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CLDN20P56880 REXO1L6P-202ENST00000619970 1078 ntBASIC15.93■□□□□ 0.14
CLDN20P56880 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.93■□□□□ 0.14
CLDN20P56880 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CLDN20P56880 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLDN20P56880 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CLDN20P56880 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLDN20P56880 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.93■□□□□ 0.14
CLDN20P56880 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.93■□□□□ 0.14
CLDN20P56880 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLDN20P56880 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CLDN20P56880 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLDN20P56880 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN20P56880 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN20P56880 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN20P56880 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.92■□□□□ 0.14
CLDN20P56880 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.92■□□□□ 0.14
CLDN20P56880 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN20P56880 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN20P56880 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN20P56880 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.92■□□□□ 0.14
CLDN20P56880 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN20P56880 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN20P56880 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.92■□□□□ 0.14
CLDN20P56880 COX5BP2-201ENST00000392354 334 ntBASIC15.92■□□□□ 0.14
CLDN20P56880 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.92■□□□□ 0.14
CLDN20P56880 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.92■□□□□ 0.14
CLDN20P56880 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.92■□□□□ 0.14
CLDN20P56880 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN20P56880 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.92■□□□□ 0.14
CLDN20P56880 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
CLDN20P56880 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.92■□□□□ 0.14
CLDN20P56880 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.92■□□□□ 0.14
CLDN20P56880 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.92■□□□□ 0.14
CLDN20P56880 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN20P56880 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN20P56880 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN20P56880 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CLDN20P56880 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.92■□□□□ 0.14
CLDN20P56880 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN20P56880 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CLDN20P56880 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.92■□□□□ 0.14
CLDN20P56880 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN20P56880 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN20P56880 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN20P56880 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CLDN20P56880 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.92■□□□□ 0.14
CLDN20P56880 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CLDN20P56880 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CLDN20P56880 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN20P56880 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN20P56880 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
CLDN20P56880 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN20P56880 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN20P56880 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN20P56880 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CLDN20P56880 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN20P56880 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN20P56880 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN20P56880 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN20P56880 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN20P56880 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CLDN20P56880 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.91■□□□□ 0.14
CLDN20P56880 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CLDN20P56880 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN20P56880 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CLDN20P56880 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN20P56880 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
CLDN20P56880 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN20P56880 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN20P56880 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CLDN20P56880 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN20P56880 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN20P56880 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN20P56880 DDX43P3-201ENST00000441064 443 ntBASIC15.91■□□□□ 0.14
CLDN20P56880 SAPCD2P3-201ENST00000455031 850 ntBASIC15.91■□□□□ 0.14
CLDN20P56880 AF238378.1-201ENST00000526806 358 ntBASIC15.91■□□□□ 0.14
CLDN20P56880 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.91■□□□□ 0.14
CLDN20P56880 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.91■□□□□ 0.14
CLDN20P56880 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN20P56880 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN20P56880 AP001269.4-201ENST00000609611 512 ntBASIC15.91■□□□□ 0.14
CLDN20P56880 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CLDN20P56880 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN20P56880 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN20P56880 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
CLDN20P56880 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN20P56880 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.91■□□□□ 0.14
CLDN20P56880 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN20P56880 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN20P56880 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
CLDN20P56880 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN20P56880 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN20P56880 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN20P56880 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN20P56880 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms