Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN8P56748 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN8P56748 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.49■□□□□ 0.23
CLDN8P56748 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN8P56748 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.48■□□□□ 0.23
CLDN8P56748 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CLDN8P56748 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.48■□□□□ 0.23
CLDN8P56748 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.48■□□□□ 0.23
CLDN8P56748 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN8P56748 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CLDN8P56748 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN8P56748 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN8P56748 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN8P56748 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN8P56748 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.48■□□□□ 0.23
CLDN8P56748 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN8P56748 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN8P56748 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
CLDN8P56748 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN8P56748 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN8P56748 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN8P56748 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.48■□□□□ 0.23
CLDN8P56748 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.48■□□□□ 0.23
CLDN8P56748 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.48■□□□□ 0.23
CLDN8P56748 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN8P56748 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN8P56748 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN8P56748 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.48■□□□□ 0.23
CLDN8P56748 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN8P56748 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CLDN8P56748 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.48■□□□□ 0.23
CLDN8P56748 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.48■□□□□ 0.23
CLDN8P56748 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.48■□□□□ 0.23
CLDN8P56748 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN8P56748 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN8P56748 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN8P56748 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN8P56748 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN8P56748 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN8P56748 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN8P56748 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN8P56748 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN8P56748 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN8P56748 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN8P56748 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN8P56748 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN8P56748 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN8P56748 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN8P56748 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN8P56748 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CLDN8P56748 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN8P56748 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN8P56748 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.47■□□□□ 0.23
CLDN8P56748 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CLDN8P56748 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN8P56748 TNRC18P3-201ENST00000441896 2691 ntBASIC16.47■□□□□ 0.23
CLDN8P56748 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN8P56748 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CLDN8P56748 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN8P56748 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
CLDN8P56748 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN8P56748 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN8P56748 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN8P56748 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN8P56748 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN8P56748 AC003669.1-201ENST00000334569 611 ntBASIC16.47■□□□□ 0.23
CLDN8P56748 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN8P56748 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.47■□□□□ 0.23
CLDN8P56748 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN8P56748 VENTXP7-201ENST00000475503 772 ntBASIC16.47■□□□□ 0.23
CLDN8P56748 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN8P56748 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
CLDN8P56748 AC011467.2-201ENST00000598425 242 ntBASIC16.47■□□□□ 0.23
CLDN8P56748 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.47■□□□□ 0.23
CLDN8P56748 AD001527.2-201ENST00000622994 785 ntBASIC16.47■□□□□ 0.23
CLDN8P56748 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN8P56748 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN8P56748 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN8P56748 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CLDN8P56748 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CLDN8P56748 AC078925.2-201ENST00000624013 1973 ntBASIC16.47■□□□□ 0.23
CLDN8P56748 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN8P56748 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN8P56748 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
CLDN8P56748 RNF216P1-203ENST00000404404 2427 ntBASIC16.47■□□□□ 0.23
CLDN8P56748 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN8P56748 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN8P56748 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CLDN8P56748 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN8P56748 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
CLDN8P56748 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN8P56748 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.46■□□□□ 0.23
CLDN8P56748 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN8P56748 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN8P56748 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CLDN8P56748 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN8P56748 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.46■□□□□ 0.23
CLDN8P56748 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN8P56748 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
CLDN8P56748 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms