Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.91■□□□□ 0.14
CDH11P55287 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CDH11P55287 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH11P55287 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH11P55287 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CDH11P55287 AC060834.1-201ENST00000443027 2032 ntBASIC15.9■□□□□ 0.14
CDH11P55287 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CDH11P55287 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH11P55287 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.9■□□□□ 0.14
CDH11P55287 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH11P55287 KRT8P47-201ENST00000604727 1398 ntBASIC15.9■□□□□ 0.14
CDH11P55287 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.9■□□□□ 0.14
CDH11P55287 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH11P55287 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CDH11P55287 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH11P55287 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH11P55287 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH11P55287 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH11P55287 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH11P55287 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH11P55287 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH11P55287 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH11P55287 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH11P55287 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH11P55287 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH11P55287 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CDH11P55287 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH11P55287 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH11P55287 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH11P55287 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH11P55287 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.9■□□□□ 0.14
CDH11P55287 AGGF1P2-201ENST00000426656 2106 ntBASIC15.9■□□□□ 0.14
CDH11P55287 AL450487.1-201ENST00000426799 995 ntBASIC15.9■□□□□ 0.14
CDH11P55287 TSPY22P-201ENST00000427496 604 ntBASIC15.9■□□□□ 0.14
CDH11P55287 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.9■□□□□ 0.14
CDH11P55287 AC113404.2-201ENST00000507884 177 ntBASIC15.9■□□□□ 0.14
CDH11P55287 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.9■□□□□ 0.14
CDH11P55287 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.9■□□□□ 0.14
CDH11P55287 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.9■□□□□ 0.14
CDH11P55287 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH11P55287 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH11P55287 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.9■□□□□ 0.14
CDH11P55287 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH11P55287 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH11P55287 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH11P55287 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH11P55287 AC018695.7-201ENST00000624587 2492 ntBASIC15.9■□□□□ 0.14
CDH11P55287 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH11P55287 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH11P55287 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH11P55287 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH11P55287 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CDH11P55287 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH11P55287 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH11P55287 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH11P55287 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH11P55287 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH11P55287 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CDH11P55287 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH11P55287 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH11P55287 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH11P55287 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH11P55287 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CDH11P55287 AC016734.2-201ENST00000624325 1377 ntBASIC15.89■□□□□ 0.13
CDH11P55287 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH11P55287 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CDH11P55287 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CDH11P55287 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH11P55287 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH11P55287 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH11P55287 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH11P55287 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH11P55287 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH11P55287 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH11P55287 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH11P55287 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH11P55287 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH11P55287 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH11P55287 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH11P55287 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH11P55287 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH11P55287 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH11P55287 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH11P55287 CHCHD2P8-201ENST00000429873 447 ntBASIC15.89■□□□□ 0.13
CDH11P55287 KRT18P65-201ENST00000439811 1286 ntBASIC15.89■□□□□ 0.13
CDH11P55287 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.89■□□□□ 0.13
CDH11P55287 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.89■□□□□ 0.13
CDH11P55287 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH11P55287 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH11P55287 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.89■□□□□ 0.13
CDH11P55287 PRELID1P1-202ENST00000567272 903 ntBASIC15.89■□□□□ 0.13
CDH11P55287 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH11P55287 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH11P55287 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH11P55287 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH11P55287 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH11P55287 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH11P55287 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH11P55287 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH11P55287 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms