Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CDH4P55283 CROCCP2-202ENST00000412962 2773 ntBASIC17.68■□□□□ 0.42
CDH4P55283 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.68■□□□□ 0.42
CDH4P55283 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH4P55283 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.68■□□□□ 0.42
CDH4P55283 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH4P55283 IGHV3-65-201ENST00000523210 341 ntBASIC17.68■□□□□ 0.42
CDH4P55283 SLC25A1P1-201ENST00000528351 927 ntBASIC17.68■□□□□ 0.42
CDH4P55283 AC106730.1-201ENST00000566722 1090 ntBASIC17.68■□□□□ 0.42
CDH4P55283 Z83851.2-201ENST00000609564 659 ntBASIC17.68■□□□□ 0.42
CDH4P55283 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CDH4P55283 AC093525.9-201ENST00000624961 1746 ntBASIC17.68■□□□□ 0.42
CDH4P55283 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH4P55283 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.68■□□□□ 0.42
CDH4P55283 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH4P55283 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH4P55283 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CDH4P55283 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH4P55283 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH4P55283 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH4P55283 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH4P55283 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH4P55283 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH4P55283 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH4P55283 ZNF259P1-201ENST00000407656 1365 ntBASIC17.67■□□□□ 0.42
CDH4P55283 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH4P55283 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.67■□□□□ 0.42
CDH4P55283 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.67■□□□□ 0.42
CDH4P55283 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH4P55283 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH4P55283 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CDH4P55283 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CDH4P55283 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH4P55283 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CDH4P55283 AC104109.2-201ENST00000602919 1418 ntBASIC17.67■□□□□ 0.42
CDH4P55283 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
CDH4P55283 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH4P55283 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH4P55283 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CDH4P55283 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH4P55283 AC009947.1-201ENST00000444350 727 ntBASIC17.67■□□□□ 0.42
CDH4P55283 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.67■□□□□ 0.42
CDH4P55283 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.67■□□□□ 0.42
CDH4P55283 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.67■□□□□ 0.42
CDH4P55283 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH4P55283 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.67■□□□□ 0.42
CDH4P55283 TERC-201ENST00000602385 541 ntBASIC17.67■□□□□ 0.42
CDH4P55283 GGTLC5P-201ENST00000617623 998 ntBASIC17.67■□□□□ 0.42
CDH4P55283 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CDH4P55283 AF228730.7-201ENST00000641842 219 ntBASIC17.67■□□□□ 0.42
CDH4P55283 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.67■□□□□ 0.42
CDH4P55283 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH4P55283 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.67■□□□□ 0.42
CDH4P55283 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH4P55283 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.67■□□□□ 0.42
CDH4P55283 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.67■□□□□ 0.42
CDH4P55283 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.67■□□□□ 0.42
CDH4P55283 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.67■□□□□ 0.42
CDH4P55283 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH4P55283 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CDH4P55283 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH4P55283 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.67■□□□□ 0.42
CDH4P55283 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.67■□□□□ 0.42
CDH4P55283 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.66■□□□□ 0.42
CDH4P55283 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CDH4P55283 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH4P55283 OR6D1P-202ENST00000641007 5290 ntBASIC17.66■□□□□ 0.42
CDH4P55283 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDH4P55283 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH4P55283 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH4P55283 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH4P55283 SLC25A1P3-201ENST00000395415 828 ntBASIC17.66■□□□□ 0.42
CDH4P55283 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.66■□□□□ 0.42
CDH4P55283 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.66■□□□□ 0.42
CDH4P55283 AC108751.1-201ENST00000490852 363 ntBASIC17.66■□□□□ 0.42
CDH4P55283 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.66■□□□□ 0.42
CDH4P55283 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDH4P55283 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CDH4P55283 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDH4P55283 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH4P55283 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH4P55283 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDH4P55283 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.66■□□□□ 0.42
CDH4P55283 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDH4P55283 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH4P55283 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CDH4P55283 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH4P55283 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH4P55283 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH4P55283 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH4P55283 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDH4P55283 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
CDH4P55283 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDH4P55283 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH4P55283 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH4P55283 PI4KAP1-204ENST00000612579 1703 ntBASIC17.65■□□□□ 0.42
CDH4P55283 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.65■□□□□ 0.42
CDH4P55283 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH4P55283 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH4P55283 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms