Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF140P52738 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ZNF140P52738 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF140P52738 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF140P52738 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.22■□□□□ 0.35
ZNF140P52738 AC090340.1-201ENST00000620778 4980 ntBASIC17.22■□□□□ 0.35
ZNF140P52738 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
ZNF140P52738 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.22■□□□□ 0.35
ZNF140P52738 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF140P52738 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF140P52738 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.22■□□□□ 0.35
ZNF140P52738 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF140P52738 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF140P52738 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF140P52738 FRMD8P1-201ENST00000440433 1524 ntBASIC17.21■□□□□ 0.35
ZNF140P52738 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.21■□□□□ 0.35
ZNF140P52738 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ZNF140P52738 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF140P52738 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF140P52738 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.21■□□□□ 0.35
ZNF140P52738 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF140P52738 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF140P52738 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF140P52738 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF140P52738 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF140P52738 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF140P52738 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.21■□□□□ 0.35
ZNF140P52738 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.21■□□□□ 0.35
ZNF140P52738 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ZNF140P52738 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF140P52738 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF140P52738 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF140P52738 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
ZNF140P52738 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.21■□□□□ 0.35
ZNF140P52738 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF140P52738 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF140P52738 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF140P52738 AC021087.4-201ENST00000563761 564 ntBASIC17.21■□□□□ 0.35
ZNF140P52738 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.21■□□□□ 0.35
ZNF140P52738 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
ZNF140P52738 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.21■□□□□ 0.35
ZNF140P52738 AL589182.2-201ENST00000619332 1049 ntBASIC17.21■□□□□ 0.35
ZNF140P52738 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ZNF140P52738 TP73-AS1-207ENST00000624167 988 ntBASIC17.21■□□□□ 0.35
ZNF140P52738 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF140P52738 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
ZNF140P52738 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ZNF140P52738 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.21■□□□□ 0.35
ZNF140P52738 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF140P52738 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF140P52738 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.21■□□□□ 0.35
ZNF140P52738 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ZNF140P52738 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.21■□□□□ 0.35
ZNF140P52738 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
ZNF140P52738 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
ZNF140P52738 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.21■□□□□ 0.34
ZNF140P52738 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF140P52738 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF140P52738 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF140P52738 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF140P52738 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF140P52738 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF140P52738 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF140P52738 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.2■□□□□ 0.34
ZNF140P52738 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.2■□□□□ 0.34
ZNF140P52738 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF140P52738 AL450487.1-201ENST00000426799 995 ntBASIC17.2■□□□□ 0.34
ZNF140P52738 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF140P52738 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.2■□□□□ 0.34
ZNF140P52738 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ZNF140P52738 AL139424.1-201ENST00000607572 797 ntBASIC17.2■□□□□ 0.34
ZNF140P52738 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.2■□□□□ 0.34
ZNF140P52738 AL691432.3-201ENST00000621860 400 ntBASIC17.2■□□□□ 0.34
ZNF140P52738 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.2■□□□□ 0.34
ZNF140P52738 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF140P52738 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF140P52738 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ZNF140P52738 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF140P52738 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF140P52738 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF140P52738 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF140P52738 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
ZNF140P52738 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.2■□□□□ 0.34
ZNF140P52738 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF140P52738 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF140P52738 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF140P52738 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF140P52738 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
ZNF140P52738 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF140P52738 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.19■□□□□ 0.34
ZNF140P52738 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF140P52738 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF140P52738 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.19■□□□□ 0.34
ZNF140P52738 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZNF140P52738 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.19■□□□□ 0.34
ZNF140P52738 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.19■□□□□ 0.34
ZNF140P52738 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
ZNF140P52738 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.19■□□□□ 0.34
ZNF140P52738 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.19■□□□□ 0.34
ZNF140P52738 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms