Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCR9P51686 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCR9P51686 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCR9P51686 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.3■□□□□ 0.04
CCR9P51686 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCR9P51686 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCR9P51686 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCR9P51686 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CCR9P51686 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCR9P51686 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.29■□□□□ 0.04
CCR9P51686 AL603756.1-201ENST00000606511 2163 ntBASIC15.29■□□□□ 0.04
CCR9P51686 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCR9P51686 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.29■□□□□ 0.04
CCR9P51686 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CCR9P51686 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CCR9P51686 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCR9P51686 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CCR9P51686 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCR9P51686 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCR9P51686 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCR9P51686 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCR9P51686 LINC02199-201ENST00000506655 2702 ntBASIC15.29■□□□□ 0.04
CCR9P51686 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCR9P51686 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCR9P51686 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCR9P51686 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.29■□□□□ 0.04
CCR9P51686 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCR9P51686 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCR9P51686 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CCR9P51686 LIN28AP1-201ENST00000429574 405 ntBASIC15.29■□□□□ 0.04
CCR9P51686 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.29■□□□□ 0.04
CCR9P51686 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.29■□□□□ 0.04
CCR9P51686 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.29■□□□□ 0.04
CCR9P51686 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.29■□□□□ 0.04
CCR9P51686 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.29■□□□□ 0.04
CCR9P51686 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.29■□□□□ 0.04
CCR9P51686 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CCR9P51686 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCR9P51686 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CCR9P51686 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCR9P51686 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CCR9P51686 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCR9P51686 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCR9P51686 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCR9P51686 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCR9P51686 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
CCR9P51686 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.29■□□□□ 0.04
CCR9P51686 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CCR9P51686 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.29■□□□□ 0.04
CCR9P51686 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCR9P51686 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
CCR9P51686 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.28■□□□□ 0.04
CCR9P51686 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCR9P51686 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCR9P51686 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCR9P51686 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCR9P51686 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.28■□□□□ 0.04
CCR9P51686 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.28■□□□□ 0.04
CCR9P51686 AL596257.1-201ENST00000641463 2694 ntBASIC15.28■□□□□ 0.04
CCR9P51686 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.28■□□□□ 0.04
CCR9P51686 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCR9P51686 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCR9P51686 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCR9P51686 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CCR9P51686 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCR9P51686 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCR9P51686 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCR9P51686 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCR9P51686 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCR9P51686 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.28■□□□□ 0.04
CCR9P51686 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.28■□□□□ 0.04
CCR9P51686 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.28■□□□□ 0.04
CCR9P51686 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.28■□□□□ 0.04
CCR9P51686 AC124947.2-201ENST00000547118 1133 ntBASIC15.28■□□□□ 0.04
CCR9P51686 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.28■□□□□ 0.04
CCR9P51686 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CCR9P51686 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCR9P51686 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCR9P51686 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CCR9P51686 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCR9P51686 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCR9P51686 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCR9P51686 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.28■□□□□ 0.04
CCR9P51686 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCR9P51686 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCR9P51686 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CCR9P51686 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCR9P51686 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
CCR9P51686 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.28■□□□□ 0.04
CCR9P51686 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCR9P51686 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCR9P51686 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.27■□□□□ 0.04
CCR9P51686 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCR9P51686 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCR9P51686 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCR9P51686 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCR9P51686 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCR9P51686 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CCR9P51686 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.27■□□□□ 0.04
CCR9P51686 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms