Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.34■□□□□ 0.21
CLK1P49759 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.34■□□□□ 0.21
CLK1P49759 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.34■□□□□ 0.21
CLK1P49759 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLK1P49759 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLK1P49759 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.34■□□□□ 0.21
CLK1P49759 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
CLK1P49759 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.34■□□□□ 0.21
CLK1P49759 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CLK1P49759 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLK1P49759 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.34■□□□□ 0.21
CLK1P49759 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLK1P49759 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CLK1P49759 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLK1P49759 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CLK1P49759 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CLK1P49759 AL391005.1-201ENST00000623953 2435 ntBASIC16.34■□□□□ 0.21
CLK1P49759 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLK1P49759 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLK1P49759 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLK1P49759 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.33■□□□□ 0.21
CLK1P49759 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CLK1P49759 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
CLK1P49759 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLK1P49759 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLK1P49759 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.33■□□□□ 0.21
CLK1P49759 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CLK1P49759 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLK1P49759 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLK1P49759 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLK1P49759 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.33■□□□□ 0.21
CLK1P49759 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLK1P49759 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLK1P49759 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CLK1P49759 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CLK1P49759 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.33■□□□□ 0.2
CLK1P49759 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLK1P49759 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.33■□□□□ 0.2
CLK1P49759 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.33■□□□□ 0.2
CLK1P49759 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLK1P49759 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.33■□□□□ 0.2
CLK1P49759 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.33■□□□□ 0.2
CLK1P49759 AL136038.3-201ENST00000561909 1096 ntBASIC16.33■□□□□ 0.2
CLK1P49759 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CLK1P49759 AL121956.5-201ENST00000625261 221 ntBASIC16.33■□□□□ 0.2
CLK1P49759 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.33■□□□□ 0.2
CLK1P49759 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLK1P49759 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLK1P49759 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLK1P49759 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLK1P49759 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.33■□□□□ 0.2
CLK1P49759 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.33■□□□□ 0.2
CLK1P49759 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CLK1P49759 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLK1P49759 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLK1P49759 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLK1P49759 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CLK1P49759 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLK1P49759 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLK1P49759 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.33■□□□□ 0.2
CLK1P49759 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLK1P49759 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLK1P49759 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLK1P49759 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.33■□□□□ 0.2
CLK1P49759 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.33■□□□□ 0.2
CLK1P49759 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.33■□□□□ 0.2
CLK1P49759 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.32■□□□□ 0.2
CLK1P49759 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLK1P49759 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLK1P49759 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLK1P49759 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLK1P49759 TSPY26P-202ENST00000565928 3884 ntBASIC16.32■□□□□ 0.2
CLK1P49759 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLK1P49759 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CLK1P49759 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
CLK1P49759 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLK1P49759 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CLK1P49759 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLK1P49759 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLK1P49759 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.32■□□□□ 0.2
CLK1P49759 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLK1P49759 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CLK1P49759 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.32■□□□□ 0.2
CLK1P49759 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.32■□□□□ 0.2
CLK1P49759 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLK1P49759 IGHGP-201ENST00000390555 1178 ntBASIC16.32■□□□□ 0.2
CLK1P49759 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.32■□□□□ 0.2
CLK1P49759 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLK1P49759 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLK1P49759 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLK1P49759 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.32■□□□□ 0.2
CLK1P49759 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.32■□□□□ 0.2
CLK1P49759 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.32■□□□□ 0.2
CLK1P49759 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.32■□□□□ 0.2
CLK1P49759 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.32■□□□□ 0.2
CLK1P49759 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.32■□□□□ 0.2
CLK1P49759 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
CLK1P49759 AC083849.1-201ENST00000615227 514 ntBASIC16.32■□□□□ 0.2
CLK1P49759 AC022898.2-201ENST00000616822 1312 ntBASIC16.32■□□□□ 0.2
CLK1P49759 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms