Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CASP4P49662 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CASP4P49662 NKAPP1-205ENST00000585790 367 ntBASIC18.89■□□□□ 0.61
CASP4P49662 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.89■□□□□ 0.61
CASP4P49662 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.89■□□□□ 0.61
CASP4P49662 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CASP4P49662 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CASP4P49662 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.89■□□□□ 0.61
CASP4P49662 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASP4P49662 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.89■□□□□ 0.61
CASP4P49662 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.89■□□□□ 0.61
CASP4P49662 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CASP4P49662 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.89■□□□□ 0.61
CASP4P49662 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CASP4P49662 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CASP4P49662 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CASP4P49662 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.88■□□□□ 0.61
CASP4P49662 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CASP4P49662 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.88■□□□□ 0.61
CASP4P49662 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CASP4P49662 AD000864.1-201ENST00000624076 2295 ntBASIC18.88■□□□□ 0.61
CASP4P49662 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASP4P49662 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.88■□□□□ 0.61
CASP4P49662 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASP4P49662 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASP4P49662 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CASP4P49662 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CASP4P49662 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.88■□□□□ 0.61
CASP4P49662 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASP4P49662 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
CASP4P49662 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.88■□□□□ 0.61
CASP4P49662 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.88■□□□□ 0.61
CASP4P49662 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.88■□□□□ 0.61
CASP4P49662 AC008608.2-201ENST00000606089 416 ntBASIC18.88■□□□□ 0.61
CASP4P49662 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
CASP4P49662 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.88■□□□□ 0.61
CASP4P49662 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASP4P49662 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASP4P49662 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CASP4P49662 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.88■□□□□ 0.61
CASP4P49662 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.88■□□□□ 0.61
CASP4P49662 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CASP4P49662 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASP4P49662 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.88■□□□□ 0.61
CASP4P49662 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CASP4P49662 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CASP4P49662 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CASP4P49662 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CASP4P49662 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CASP4P49662 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.87■□□□□ 0.61
CASP4P49662 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
CASP4P49662 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CASP4P49662 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.87■□□□□ 0.61
CASP4P49662 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CASP4P49662 FGFR3P6-201ENST00000457012 610 ntBASIC18.87■□□□□ 0.61
CASP4P49662 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CASP4P49662 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.87■□□□□ 0.61
CASP4P49662 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CASP4P49662 AL355877.3-201ENST00000622820 899 ntBASIC18.87■□□□□ 0.61
CASP4P49662 AC097637.2-201ENST00000624096 1997 ntBASIC18.87■□□□□ 0.61
CASP4P49662 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CASP4P49662 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CASP4P49662 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.86■□□□□ 0.61
CASP4P49662 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CASP4P49662 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASP4P49662 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CASP4P49662 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
CASP4P49662 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CASP4P49662 EGFEM1P-202ENST00000431685 1563 ntBASIC18.86■□□□□ 0.61
CASP4P49662 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CASP4P49662 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASP4P49662 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CASP4P49662 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CASP4P49662 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASP4P49662 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.86■□□□□ 0.61
CASP4P49662 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASP4P49662 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASP4P49662 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASP4P49662 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CASP4P49662 RBM17P3-201ENST00000417687 1192 ntBASIC18.86■□□□□ 0.61
CASP4P49662 AL450487.1-201ENST00000426799 995 ntBASIC18.86■□□□□ 0.61
CASP4P49662 SAPCD2P3-201ENST00000455031 850 ntBASIC18.86■□□□□ 0.61
CASP4P49662 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CASP4P49662 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CASP4P49662 SART3-203ENST00000546611 1184 ntBASIC18.86■□□□□ 0.61
CASP4P49662 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.86■□□□□ 0.61
CASP4P49662 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.86■□□□□ 0.61
CASP4P49662 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.86■□□□□ 0.61
CASP4P49662 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASP4P49662 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASP4P49662 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CASP4P49662 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CASP4P49662 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CASP4P49662 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CASP4P49662 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASP4P49662 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CASP4P49662 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASP4P49662 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CASP4P49662 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CASP4P49662 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms